How to use the tumor purity information if the input data is created without using parser

morrislab / phylowgs

Application for inferring subclonal composition and evolution from whole-genome sequencing data.

GNU General Public License v3.0

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How to use the tumor purity information if the input data is created without using parser #144

Open adhisadi opened 10 months ago

adhisadi commented 10 months ago

Hi,

I have created input data for pyclone before. I have used the same data (+ other columns from my original data) to create an input for phylowgs. I have ssm and cnv data without using the parser script. How do I use tumor purity information in this case? It seems like multi-evolve does not need an argument for tumor purity.

Thanks.

-Sadi