Closed rachelzeng98 closed 1 year ago
Hi!
I really like this package and is trying to use it for my analysis.
I was going through the tutorial but PyWGCNA.getGeneList would get an error. HTTPError: 504 Server Error: Gateway Time-out for url: http://uswest.ensembl.org/biomart/martservice
It seems like this is due to server = biomart.BiomartServer('http://uswest.ensembl.org/biomart') this wbsite cannot be opened.
For my own analysis, I will use my own gene annotation but I kind of wanna be able to go through this tutorial. I am wondering is there another way to get the genelist?
Thank you,
Hi!
I really like this package and is trying to use it for my analysis.
I was going through the tutorial but PyWGCNA.getGeneList would get an error. HTTPError: 504 Server Error: Gateway Time-out for url: http://uswest.ensembl.org/biomart/martservice
It seems like this is due to server = biomart.BiomartServer('http://uswest.ensembl.org/biomart') this wbsite cannot be opened.
For my own analysis, I will use my own gene annotation but I kind of wanna be able to go through this tutorial. I am wondering is there another way to get the genelist?
Thank you,