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mortazavilab / PyWGCNA

PyWGCNA is a Python package designed to do Weighted Gene Correlation Network analysis (WGCNA)
https://academic.oup.com/bioinformatics/advance-article/doi/10.1093/bioinformatics/btad415/7218311
MIT License
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a issue for findModules() #93

Closed songbowen1995 closed 3 months ago

songbowen1995 commented 3 months ago

AttributeError: 'DataFrame' object has no attribute 'Value'. Did you mean: 'values'?

nargesr commented 3 months ago

Hi @songbowen1995

I need more information to be able to help you with the error you got. Can you send me full error? Also which function did give you this error?

songbowen1995 commented 3 months ago

Thanks @nargesr I have resolved this issue and thank you very much for your reply. The reason for the error is related to my gene expression matrix. I used TMT mass spectrometry data for protein abundance, but did not normalize it. Additionally, as a test, the protein I inserted was too small, which caused this error to occur. The problem has been resolved so far. Thank you very much.

nargesr commented 3 months ago

that's great! I'm going to close this issue then. but in the future, If you face any errors, please include the full error along with the command you used. Thank you so much