mortazavilab / lapa

Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.
https://www.biorxiv.org/content/10.1101/2022.11.08.515683v1
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Workaround for overflow error mentioned in issue #20 #23

Open leetaiyi opened 10 months ago

leetaiyi commented 10 months ago

If detected that the product of the sizes of df and gr_bam are over 2^31, will subset them both to avoid the overflow error. Will cause in a few lost edgecases near where the divisions are though. Now works on the cases where it failed due to this error.