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mothur / mothur.github.io

wiki for the mothur software package
https://mothur.github.io
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Question on: README for the SILVA v138.1 reference files #105

Closed biobee closed 1 year ago

biobee commented 1 year ago

Is the taxonomy file linked correctly. This seems to be a taxonomic summary file: wget https://www.arb-silva.de/fileadmin/silva_databases/release_138_1/Exports/taxonomy/tax_slv_ssu_138.1.txt.gz

At least, it seems the file intended (now?) is: https://www.arb-silva.de/fileadmin/silva_databases/release_138_1/Exports/taxonomy/taxmap_slv_ssu_ref_nr_138.1.txt.gz ?

Kind regards,

biobee commented 1 year ago

my mistake, I expected a taxmap file related the sequence IDs to taxonomy