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motiwari / BanditPAM

BanditPAM C++ implementation and Python package
MIT License
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Fix Cmake build linker issue #121

Closed mailology closed 2 years ago

mailology commented 3 years ago 
[100%] Linking CXX executable BanditPAM
Undefined symbols for architecture x86_64:
  "_PyCapsule_GetPointer", referenced from:
      _import_array() in main.cpp.o
      _import_array() in libBanditPAM_LIB.a(kmedoids_algorithm.cpp.o)
      _import_array() in libBanditPAM_LIB.a(banditpam.cpp.o)
      _import_array() in libBanditPAM_LIB.a(pam.cpp.o)
  "_PyCapsule_Type", referenced from:
      _import_array() in main.cpp.o
      _import_array() in libBanditPAM_LIB.a(kmedoids_algorithm.cpp.o)
      _import_array() in libBanditPAM_LIB.a(banditpam.cpp.o)
      _import_array() in libBanditPAM_LIB.a(pam.cpp.o)
  "_PyErr_Format", referenced from:
      _import_array() in main.cpp.o
      _import_array() in libBanditPAM_LIB.a(kmedoids_algorithm.cpp.o)
      _import_array() in libBanditPAM_LIB.a(banditpam.cpp.o)
      _import_array() in libBanditPAM_LIB.a(pam.cpp.o)
  "_PyErr_SetString", referenced from:
      _import_array() in main.cpp.o
      _import_array() in libBanditPAM_LIB.a(kmedoids_algorithm.cpp.o)
      _import_array() in libBanditPAM_LIB.a(banditpam.cpp.o)
      _import_array() in libBanditPAM_LIB.a(pam.cpp.o)
  "_PyExc_AttributeError", referenced from:
      _import_array() in main.cpp.o
      _import_array() in libBanditPAM_LIB.a(kmedoids_algorithm.cpp.o)
      _import_array() in libBanditPAM_LIB.a(banditpam.cpp.o)
      _import_array() in libBanditPAM_LIB.a(pam.cpp.o)
  "_PyExc_RuntimeError", referenced from:
      _import_array() in main.cpp.o
      _import_array() in libBanditPAM_LIB.a(kmedoids_algorithm.cpp.o)
      _import_array() in libBanditPAM_LIB.a(banditpam.cpp.o)
      _import_array() in libBanditPAM_LIB.a(pam.cpp.o)
  "_PyImport_ImportModule", referenced from:
      _import_array() in main.cpp.o
      _import_array() in libBanditPAM_LIB.a(kmedoids_algorithm.cpp.o)
      _import_array() in libBanditPAM_LIB.a(banditpam.cpp.o)
      _import_array() in libBanditPAM_LIB.a(pam.cpp.o)
  "_PyObject_GetAttrString", referenced from:
      _import_array() in main.cpp.o
      _import_array() in libBanditPAM_LIB.a(kmedoids_algorithm.cpp.o)
      _import_array() in libBanditPAM_LIB.a(banditpam.cpp.o)
      _import_array() in libBanditPAM_LIB.a(pam.cpp.o)
  "__Py_Dealloc", referenced from:
      _import_array() in main.cpp.o
      _import_array() in libBanditPAM_LIB.a(kmedoids_algorithm.cpp.o)
      _import_array() in libBanditPAM_LIB.a(banditpam.cpp.o)
      _import_array() in libBanditPAM_LIB.a(pam.cpp.o)
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
make[2]: *** [src/BanditPAM] Error 1
make[1]: *** [src/CMakeFiles/BanditPAM.dir/all] Error 2
make: *** [all] Error 2