Closed ucassee closed 1 year ago
Hi,
You can see with the command:
cat ANT29P4-06_taxonomy_profile.txt | grep -v "0.0000000000"
the species that are not zero. You have 52 ref-mOTUs, 1 meta-mOTU and 56 ext-mOTUs, plus the unassigned
.
Hi Alessio,
I get it. Thanks for your timely response. I will use mOTUs to analyze more samples.
Best, Yingli
Nice! Thanks for your interest in mOTUs. Let us know if everything works out.
Hi,
I use the following command to run mOTUs, but it seems that no reads are mapped to the reference database.
motus profile -s ANT29P4-06_1.fastq -n ANT29P4-06 -t 40 -q -o ANT29P4-06_taxonomy_profile.txt
My sample is from Antarctic Pole. The length of my reads is 150bp. I attached the output file. I was wondering whether this result is normal. ANT29P4-06_taxonomy_profile.txt
Thanks,