Open xiangjianmao opened 5 months ago
I believe indexing your database fasta via bwa will make this error disappear
Dear @xiangjianmao
The database is downloaded as an indexed bwa database already. My guess is that the read file is corrupted or that bwa is not installed properly. Can you check with
gzip -t ERR...gz
bwa mem
and share the result.
Error: bwa failed Error: Cannot call bwa on the file ERR4563329.fastq.gz![屏幕截图 2024-03-13 212311](https://github.com/motu-tool/mOTUs/assets/51312239/26fd5f50-1165-4a0c-8b1a-20c33dcdfe9e)