search

motu-tool / mOTUs

motus - a tool for marker gene-based OTU (mOTU) profiling
GNU General Public License v3.0
147 stars 25 forks source link

Using mOTU with SPIREs database #128

Open morgansobol opened 6 days ago

morgansobol commented 6 days ago

Hi,

I would like to profile >7000 16S fasta files against SPIRES. Does mOTU allow that? My goal is to assign habitat preferences for each sequence based on relative abundance of an OTU, as well as to determine habitat richness by evaluating how many different environments each sequence is mapped to.

Thanks in advance! Morgan