Closed plmeta closed 2 years ago
Hello,
That's weird. Can you try to run:
conda install -c bioconda/label/cf201901 motus
Hi, thanks for the quick reply. I think I found the issue. I am installing with a .yml file and there are some dependencies that forced motus to install a lower version.
I see. i guess samtools or bwa, or maybe something related to metaSNV. Is it working now?
I haven't unfortunately. I managed to install 3.0.1 once but now I couldn't manage again. It is now version 2.0.1 with dependencies like blow. I tried also both py3.7 and py3.8.
maybe create a new conda environment can help? https://github.com/motu-tool/mOTUs/wiki/Installation#install-dependencies-with-conda
Hi, finnally I made it to work.
python 3.8.1 + samtools 1.9 + bwa 0.1.17, then I am getting motus 3.0.1 by: conda install -c bioconda motus=3.0.1
Nice!
I know it can be messy with the different tool versions, and it's not completely under our control. Thanks for cheking. I can point to this discussion if anyone gets the same problem!
Hello,
I wonder if conda install is working now for version 3.0.1. I saw the package is already on conda. But it still installs version 1.0 when using it.
Thanks!
All the best, pl