mphowardlab / gsd-vmd

A VMD molfile plugin reader for HOOMD-blue GSD files.
BSD 3-Clause "New" or "Revised" License
15 stars 2 forks source link

Fix conversion of hoomd box to vmd #9

Closed ksil closed 3 years ago

ksil commented 3 years ago

I think the vmd lattice constants (if A, B, and C are indeed lattice constants) should also involve the tilt factors, consistent with HOOMD's definition: https://hoomd-blue.readthedocs.io/en/stable/box.html. (I noticed in some shear simulations that the box looked too small in the gradient direction!)

mphoward commented 3 years ago

Thanks again!