mpi2 / PhenotypeData

Reorganisation, update, and extend code from PhenotypeArchive
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EA - IP - LA parameter mappings in the pipeline core #601

Closed viomunoz closed 2 years ago

viomunoz commented 3 years ago

In order to provide corresponding charts for the same parameter at different Life Stages, we need a mapping an EA - IP - LA parameters.

We need to locate the mapping or have it done.

jmason-ebi commented 3 years ago

Relevant section from DEV call notes:

https://docs.google.com/document/d/1ZqmGccIYHB3WJJpkLeuo2AMz-XQUn9ZXtTkOzW_Q4JI/edit#heading=h.60kyk4hsg3vr

Update 02/10/2020 Implemented on Impress "Comparable Parameter" groups. Primarily aimed at identifying parameters between early and late adult pipelines which could be compared for analysis purposes. This results in the addition of the comparableGroupId field to the parameter objects. https://api.mousephenotype.org/impress/parameter/17602
Mapping done for matching procedure versions

jmason-ebi commented 3 years ago
viomunoz commented 3 years ago

Still in progress, getting ready for DR 15.

rwilson-ebi commented 3 years ago

Plan is to wait for DR 15 to include the mappings in the Solr Cores

ficolo commented 3 years ago

Added to pipeline_core on DR15.0, now available on DEV https://wwwdev.ebi.ac.uk/mi/impc/dev/solr/pipeline/select?q=comparable_parameter_group:*

viomunoz commented 2 years ago

Added "comparable_parameter_group".