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mpi2 / impc-publication-curation

IMPC publications curation app
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Fix invalid alleles found in publication list #34

Closed viomunoz closed 3 years ago

viomunoz commented 4 years ago

Issue: An internal user has reported invalid alleles in the IMPC-related publication list.

Requirement: Need to trace and fix, as appropriate.

List of invalid alleles: Invalid allele found: 1010 Prkdc Invalid allele found: 1010 Dmd Invalid allele found: 1010 Gt(ROSA)26Sor<tm1(DTA)Lky> Invalid allele found: 1010 Gt(ROSA)26Sor<tm1(EYFP)Cos> Invalid allele found: 1026 Elf3 Invalid allele found: 1525 Bcl2l11 Invalid allele found: 1525 Tg(Pdgfrb-cre)35Vli Invalid allele found: 1525 Tg(Cdh5-cre)7Mlia Invalid allele found: 1613 Crb1 Invalid allele found: 2187 Lep Invalid allele found: 2187 Lepr Invalid allele found: 2762 Myo7a Invalid allele found: 2762 Myo6 Invalid allele found: 2817 Crb1 Invalid allele found: 2817 Crb1<rd8+em1Mvw> Invalid allele found: 2852 Cyfip2 Invalid allele found: 2919 Nlrp12<C57BL/6J> Invalid allele found: 2919 Nlrp12<C57BL/6N> Invalid allele found: 2930 Gt(ROSA)26Sor<tm1(DTA)Mrc> Invalid allele found: 2930 Tg(Ddx4-cre)1Dcas Invalid allele found: 2930 Tyr Invalid allele found: 2952 Tyr Invalid allele found: 3122 Gt(ROSA)26Sor Invalid allele found: 3122 Gt(ROSA)26Sor Invalid allele found: 3122 Gt(ROSA)26Sor<tm1(EYFP)Cos> Invalid allele found: 3122 Gt(ROSA)26Sor<tm4(ACTB-tdTomato,-EGFP)Luo> Invalid allele found: 3122 Gt(ROSA)26Sor<tm14(CAG-tdTomato)Hze> Invalid allele found: 3122 Tg(CAG-Bgeo/GFP)21Lbe Invalid allele found: 3122 Tg(Tek-cre)12Flv Invalid allele found: 3122 Tg(GFAP-cre)25Mes Invalid allele found: 3122 Tg(EIIa-cre)C5379Lmgd Invalid allele found: 3122 Tg(Thy1-cre)1Vln Invalid allele found: 3122 Tg(Grik4-cre)G32-4Stl Invalid allele found: 3122 Tg(Fabp4-cre)1Rev Invalid allele found: 3122 Tg(Cyp39a1-cre)1Aibs Invalid allele found: 3122 Tg(CAG-Bgeo,-DsRed*MST)1Nagy Invalid allele found: 3132 Cdh23<CBA/CaJ> Invalid allele found: 3132 Cdh23 one more dodgy allele 377 <tm1.1(KOMP)Vlcg> miceBrd4<tm1a(EUCOMM)Wtsi> this looks like it should be just Lipa LALLipa<tm1a(EUCOMM)Hmgu> Ptrps<tm1a(KOMP)Mbp> think this should be ptprs

viomunoz commented 4 years ago

This issue has been fixed.