Closed mpkorstanje closed 9 years ago
Done. Improved implementation. Unified gap costs to always be negative (and thus gap values). Merged SWG and SWGWA. Removed non-sensical gap cost function (wtf was that, something like soundex in general purpose alg).
SmithWatermanGotoh and SmithWatermanGotohWindowedAffine need to be refactored and checked against research papers.