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mptrsen / Orthograph

Orthology prediction using a graph-based, reciprocal approach with profile hidden Markov models
GNU General Public License v3.0
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Can't locate object method "new" #30

Closed Arctictern6 closed 6 years ago

Arctictern6 commented 6 years ago

when I test the software,the following error showed: Can't locate object method "new" via package "Parallel::ForkManager" at ./orthograph-analyzer line 457.

Could you help me solve it? Thank you

mptrsen commented 6 years ago

Please make sure you have the Perl module Parallel::ForkManager installed. You can get it from CPAN.

Let me know if that doesn't solve the problem.

Arctictern6 commented 6 years ago

Indeed, there is no Perl module Parallel::ForkManager in my computer,I have solved it. Thank you very much. And I have another question now: When I proceeded the last step,it showed that:

Backing up old output files... Old output files backed up in 'test_data/output/Orussus_abietinus/backup-2018-06-29_19:26.tar.bz2' (23 files). Redundant argument in printf at ./orthograph-analyzer line 847. Fatal: Set 'test_set' does not exist in database 'orthograph'. Typo in config file /home/bio/Transcriptome/Orthograph-0.6.3/orthograph.conf? Use orthograph-manager first to set up your ortholog sets. Ask your administrator.

mptrsen commented 6 years ago

Please stop editing your comments to ask new questions every hour. I am now closing this issue as the original problem has been resolved. For different problems, please open a new issue if you think it might be a bug. Otherwise, please write me an email. Thank you.