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mquinodo / AutoMap

Tool to find regions of homozygosity (ROHs) from sequencing data.
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--common error #3

Closed abrusell closed 3 years ago

abrusell commented 3 years ago

When using --common option, after the computation I get this error, just before ending analysis: AutoMap/Scripts/common_analysis.sh: line 83: printf: 24.8027: invalid number

mquinodo commented 3 years ago

Dear user, The problem could come from LC_NUMERIC. I edited the script to force LC_NUMERIC="en_US.UTF-8" for the command in question. It should avoid the previous error.

abrusell commented 3 years ago

Ok, it works now! Thanks