This PR fixes #56
I have included extensive documentation on why this issue arises. Fixed it here to make things work for existing data sets but going forward I think we should ensure that a covidence_id is not associated with multiple ids in priority-pathogens pipeline.
[X ] I have added new dependencies in DESCRIPTION
[ X] I have bumped the version number in DESCRIPTION
[ X] I have updated the NEWS.md
[ X] I have added unit tests using testthat
[ X] I have checked that the package can install locally using devtools::install_local("<path-to-epireview>")
[ X] I have added documentation where required
[ NA] My documentation includes examples of how to use the function
This PR fixes #56 I have included extensive documentation on why this issue arises. Fixed it here to make things work for existing data sets but going forward I think we should ensure that a covidence_id is not associated with multiple ids in priority-pathogens pipeline.
DESCRIPTION
DESCRIPTION
NEWS.md
testthat
devtools::install_local("<path-to-epireview>")