Thanks for your contribution to epireview! Please include the following information:
A description of this PR, and why it is needed.
For SARS-CoV-1 we extended the options for parameter_uncertainty_singe_type to distinguish between uncertainty and variability (as an intermediary fix for the issues identified as part of the Ebola work as SARS extractions had already started). For the filter_df_for_metamean function we need to take account of the different added options.
A summary of the changes.
We check for the different options available as part of the new SARS options. This won't have any impact on prior pathogens (Lassa).
Links to any issues it fixes.
Checklist:
[X] I have checked that the package can install locally using devtools::install_local("<path-to-epireview>")
Pull Request
Thanks for your contribution to
epireview
! Please include the following information:parameter_uncertainty_singe_type
to distinguish between uncertainty and variability (as an intermediary fix for the issues identified as part of the Ebola work as SARS extractions had already started). For thefilter_df_for_metamean
function we need to take account of the different added options.Checklist:
devtools::install_local("<path-to-epireview>")