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mrc-ide / safir

squire and friends individual rewrite
https://mrc-ide.github.io/safir/
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Feat/differential inf vax nat #65

Closed slwu89 closed 2 years ago

slwu89 commented 2 years ago

address #64

codecov[bot] commented 2 years ago

Codecov Report

Merging #65 (2431811) into main (eefd052) will decrease coverage by 1.68%. The diff coverage is 54.61%.

Impacted file tree graph

@@            Coverage Diff             @@
##             main      #65      +/-   ##
==========================================
- Coverage   79.50%   77.82%   -1.69%     
==========================================
  Files          36       36              
  Lines        2162     2264     +102     
==========================================
+ Hits         1719     1762      +43     
- Misses        443      502      +59
Impacted Files Coverage Δ
R/events_nat.R 39.68% <0.00%> (-29.77%) :arrow_down:
R/parameters_nat.R 62.50% <0.00%> (-37.50%) :arrow_down:
R/variables_nat.R 50.00% <0.00%> (-50.00%) :arrow_down:
src/process_infection_vaccine.cpp 84.61% <58.33%> (-15.39%) :arrow_down:
R/efficacy_nat.R 92.00% <100.00%> (+2.81%) :arrow_up:
R/events_exposure_vaccine.R 100.00% <100.00%> (ø)
R/process_infection_vaccine.R 100.00% <100.00%> (ø)
R/process_nat.R 100.00% <100.00%> (ø)
src/utils.cpp 97.46% <0.00%> (-0.07%) :arrow_down:
src/process_infection.cpp 100.00% <0.00%> (ø)
... and 3 more

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