Would be good to integrate this in at some point - thinking that possibly we could eventually put users in a position where there's an argument within run_explicit_SEEIR like:
run_explicit_SEEIR(... type = "deterministic") or
run_explicit_SEEIR(... type = "stochastic")
which then runs the relevant model. Inputs and outputs are identical (need to double check this but fairly certain), so it shouldn't be too difficult!
This branch contains a deterministic version of the stochastic model (explicit_SEEIR) we're currently using: https://github.com/mrc-ide/squire/tree/js_model_package
Would be good to integrate this in at some point - thinking that possibly we could eventually put users in a position where there's an argument within run_explicit_SEEIR like:
which then runs the relevant model. Inputs and outputs are identical (need to double check this but fairly certain), so it shouldn't be too difficult!