mrirecon / bart

BART: Toolbox for Computational Magnetic Resonance Imaging
https://mrirecon.github.io/bart/
BSD 3-Clause "New" or "Revised" License
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twixread: VD starVIBE data #247

Open mckib2 opened 3 years ago

mckib2 commented 3 years ago

Does twixread support reading VD radial data? I have starVIBE raw data that I am unable to get twixread to handle. Could be related to #186

On latest master:

./bart twixread -A meas_MID00026_FID08491_t1_starvibe_60spokes_benz.dat test
WARN: BART version is not reproducible.
VD Header. MeasID: 26 FileID: 8491 Scans: 2
Patient: xxxxxxxxxxxxxxx
Protocol: t1_starvibe_60spokes_benz
VD Header. MeasID: 26 FileID: 8491 Scans: 2
Patient: xxxxxxxxxxxxxxx
Protocol: t1_starvibe_60spokes_benz
ERROR: shared cfl test.cfl
Aborted (core dumped)

Specifying -x384 -r60 -c12 also does not help -- it appears to be reading the header incorrectly:

./bart twixread -x384 -c12 -r60 meas_MID00026_FID08491_t1_starvibe_60spokes_benz.dat test
WARN: BART version is not reproducible.
VD Header. MeasID: 26 FileID: 8491 Scans: 2
Patient: xxxxxxxxxxxxxxx
Protocol: t1_starvibe_60spokes_benz
WARN: Wrong number of samples: 384 != 24912.
WARN: Stopping.

Any clarification or help would be appreciated. I've never had issues with reading Cartesian VB data, but VD seems to encounter numerous issues.

mscipio commented 2 years ago

I have been trying to use twixread to decode both spiral and radial VD twix files, and I still get the same type of error.

Has any progress been made (or planned) in this direction?

uecker commented 2 years ago

There were some improvements on the master branch.