Please update vignette - Githubissues

mritchielab / FLAMES

A framework for performing single-cell and bulk read full-length analysis of mutations and splicing.

https://mritchielab.github.io/FLAMES/

GNU General Public License v3.0

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Please update vignette #15

Closed HenriettaHolze closed 11 months ago

HenriettaHolze commented 1 year ago

Hi Oliver,

I am trying to use FLAMES to demultiplex single cell nanopore data. Installed it today from bioconductor, session info: other attached packages: [1] FLAMES_1.2.2
I tried using the vignette but the example code throws an error when creating the config file with create_config.
Could you please update the vignette and recommend default values for the parameters? Thanks!

Cheers, Henrietta

OliverVoogd commented 1 year ago

Hi Henrietta, Thanks for using FLAMES. Would you be able to provide the error that results when using create_config?

Thanks!

HenriettaHolze commented 11 months ago

Switched to FLAMES_1.7.4 and it resolved the issue