Fix GFF parser for gencode

mritchielab / FLAMES

A framework for performing single-cell and bulk read full-length analysis of mutations and splicing.

https://mritchielab.github.io/FLAMES/

GNU General Public License v3.0

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Fix GFF parser for gencode #39

Closed maxim-h closed 4 months ago

maxim-h commented 4 months ago

While troubleshooting another issue (#31) I realized that the gene_to_transcript map is malformed and links all transcripts to the same "gene" called "gene_id". Looks like just a typo.

ChangqingW commented 4 months ago

Many thanks