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mrmckain / Fast-Plast

Automated de novo assembly of whole chloroplast genomes.
MIT License
44 stars 14 forks source link

Too many erroneous kmers #49

Open kmmahan opened 3 years ago

kmmahan commented 3 years ago

It auto determines the best kmer sizes as 55, 87, and 121. Can I lower the kmer sizes because I get a "too many erroneous kmers" warning?

mrmckain commented 3 years ago

At the moment, no. However, that is a possible update. Keep watch on updates and I will see what I can do.