mrmckain / Fast-Plast

Automated de novo assembly of whole chloroplast genomes.
MIT License
43 stars 14 forks source link

.fsa file empty in 5_Plastome_Finishing #51

Open kmmahan opened 3 years ago

kmmahan commented 3 years ago

Why would it make the 5_Plastome_Finishing directory but have only empty .fsa files?

mrmckain commented 3 years ago

I assume afin didn't have an output, which either means it didn't run or it wasn't given a starting contig file. Did another step fail along the way?