Hello, could you please provide the test data of the successful running result of the software? I want to see if my data is just not running out of the final result or is it due to a setup problem? I can get afin.fa results, but afin_iter0.fa_positional_genes.blastn and Chloroplast_gene_composition_of_afin_contigs.txt files are empty. From the Progress.log file I see the sentence "After afin, there are 0 contigs with a maximum size of 0 and a minimum size of 100000000". The afin.fa file contains only one sequence with the name ">contig0_len_130483_test4_afin".
Hello, could you please provide the test data of the successful running result of the software? I want to see if my data is just not running out of the final result or is it due to a setup problem? I can get afin.fa results, but afin_iter0.fa_positional_genes.blastn and Chloroplast_gene_composition_of_afin_contigs.txt files are empty. From the Progress.log file I see the sentence "After afin, there are 0 contigs with a maximum size of 0 and a minimum size of 100000000". The afin.fa file contains only one sequence with the name ">contig0_len_130483_test4_afin".