scRNA data week

[mrunalimanj]

AH super important distinction:

• RNA-seq reads are handled well with kallisto
• scRNA data is best with scvi-tools, among other things.

• tools: kallisto is great and I'd love to learn too (pachter) hot: bayesian applications for scRNA data: scvi-tools (Yosef)

ultimately, both are really fundamental parts of processing and learning from RNA data!

[mrunalimanj]

http://mcb112.org/w02/w02-lecture.html is mcb112 writeup on Kallisto;

more exercise-y: http://mcb112.org/w02/w02-section.html the hw: http://mcb112.org/w02/w02-homework.html (I saved the data files)