Compare trees with different tips

[ms609]

A first step towards #92

This PR should now allow a user to compare trees with non-identical sets of labels using TreeDistance() / MutualClusteringInformation() / ClusteringInfoDistance().

Meticulous testing has not yet been attempted.

[codecov[bot]]

Codecov Report

Merging #93 (31b1390) into master (c1b3d99) will increase coverage by 0.06%. The diff coverage is 100.00%.

:exclamation: Current head 31b1390 differs from pull request most recent head ceb723c. Consider uploading reports for the commit ceb723c to get more accurate results

@@            Coverage Diff             @@
##           master      #93      +/-   ##
==========================================
+ Coverage   98.26%   98.32%   +0.06%     
==========================================
  Files          30       30              
  Lines        2013     2155     +142     
==========================================
+ Hits         1978     2119     +141     
- Misses         35       36       +1     

Impacted Files	Coverage Δ
R/median.R	100.00% <ø> (ø)
R/tree_distance.R	100.00% <100.00%> (ø)
R/tree_distance_info.R	100.00% <100.00%> (ø)
R/tree_distance_kendall-colijn.R	94.93% <100.00%> (-1.27%)	:arrow_down:
R/tree_distance_msi.R	100.00% <100.00%> (ø)
R/tree_distance_nye.R	100.00% <100.00%> (ø)
R/tree_distance_utilities.R	100.00% <100.00%> (ø)
src/tree_distances.cpp	99.70% <100.00%> (+<0.01%)	:arrow_up:
src/tree_distance_functions.cpp	100.00% <0.00%> (ø)

:mega: We’re building smart automated test selection to slash your CI/CD build times. Learn more

[github-actions[bot]]

RcppDeepState Report

No error has been reported by RcppDeepState

Analyzed functions summary

function name	tested inputs	inputs with issues
cpp_mast	3	0
cpp_nni_distance	3	0
lapjv	3	0

Report details

• Report generated by: 58b11ec
• Inputs generator seed: 1676640830