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msberends / AMR

Functions to simplify and standardise antimicrobial resistance (AMR) data analysis and to work with microbial and antimicrobial properties by using evidence-based methods, as described in https://doi.org/10.18637/jss.v104.i03.
https://msberends.github.io/AMR/
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Added support for 'html' in italicize_taxonomy() #134

Closed r0ssing closed 6 months ago

r0ssing commented 6 months ago

First of all - Thanks for providing this great package! 👍

This small PR adds support for "html" as a valid type in italicize_taxonomy() as well as updates the relevant tinytest and roxy documentation.

I find it particularly useful to have the option of html output in the context producing html reports with knitr.

msberends commented 6 months ago

This is absolutely fantastic, many thanks!!