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msberends / AMR

Functions to simplify and standardise antimicrobial resistance (AMR) data analysis and to work with microbial and antimicrobial properties by using evidence-based methods, as described in https://doi.org/10.18637/jss.v104.i03.
https://msberends.github.io/AMR/
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Veillonella #47

Closed jukkiebah closed 3 years ago

jukkiebah commented 3 years ago

hai

I've noticed a small error: veillonella is a gram-negative coccoid bacterium. AMR mo_gramstain() classifies it as a gram-positive coccus. greetings!

msberends commented 3 years ago

I see. It’s a member of the phylum Firmicutes, whose members are considered Gram-positive. Except for the class Negativicutes which is part of the phylum.

Thanks for the catch! We’ll update the mo_gramstain() function!