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mschauer / CausalInference.jl

Causal inference, graphical models and structure learning in Julia
https://mschauer.github.io/CausalInference.jl/latest/
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WIP: FCI algorithm #9

Closed schnirz closed 5 years ago

schnirz commented 5 years ago

implementation of FCI algorithm as described in Zhang2008

Partial Ancestral Graphs (PAGs) are represented as MetaDiGraphs with an edge property :mark that is set to :tail, :arrow or :circle to denote the end of an edge at the dst end of a MetaDiGraph edge

coveralls commented 5 years ago

Coverage Status

Coverage increased (+1.6%) to 70.14% when pulling ceb3a586657443a3c002b686b0298fbe03cbfa21 on fci into 39568946f7ff357754e971b1261384502975e369 on master.

coveralls commented 5 years ago

Coverage Status

Coverage increased (+15.5%) to 83.993% when pulling 236ecf5d7739a6c525c3e43f44f0e5b29ded6378 on fci into 39568946f7ff357754e971b1261384502975e369 on master.

codecov-io commented 5 years ago

Codecov Report

Merging #9 into master will increase coverage by 15.45%. The diff coverage is 73.51%.

Impacted file tree graph

@@             Coverage Diff             @@
##           master       #9       +/-   ##
===========================================
+ Coverage   68.54%   83.99%   +15.45%     
===========================================
  Files           6        7        +1     
  Lines         391      606      +215     
===========================================
+ Hits          268      509      +241     
+ Misses        123       97       -26
Impacted Files Coverage Δ
src/dsep.jl 98.24% <100%> (+36.84%) :arrow_up:
src/skeleton.jl 87.93% <100%> (+19.5%) :arrow_up:
src/pc.jl 88.39% <50%> (+16.96%) :arrow_up:
src/fci.jl 73.36% <73.36%> (ø)
src/misc.jl 100% <0%> (+14.28%) :arrow_up:
src/klentropy.jl 85.89% <0%> (+19.23%) :arrow_up:
src/cpdag.jl 89.04% <0%> (+20.54%) :arrow_up:
... and 1 more

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