sample sheet parser appears to assume column order

msettles / expHTS

Python application for "Experimental High Throughput Sequencing"

Apache License 2.0

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sample sheet parser appears to assume column order #40

Open msettles opened 8 years ago

msettles commented 8 years ago

Column SEQUENCE_ID looks for raw data, column SAMPLE_ID is new sample name, when SAMPLE_ID is the first column, expHTS thinks its SEQUENCE_ID and fails

atgerritsen commented 8 years ago

Related: the column headers are named too ambiguously.

msettles commented 8 years ago

expand?

atgerritsen commented 8 years ago

I have trouble differentiating them, because SAMPLE_ID could apply to either the sequences or the names of the sample. They are too interchangeable in my brain so I would like them to be named unambiguously.

msettles commented 8 years ago

Those column names are historical, so propose something