Fix 2x2 rule - Githubissues

mskcc / ACCESS-Pipeline

cfDNA Sequencing Pipeline with UMI

MIT License

10 stars 3 forks source link

Fix 2x2 rule #221

Closed maysunh closed 4 years ago

maysunh commented 4 years ago

Changed the create_fillout_summary so that the number of samples with alt count above threshold includes samples with the alt_thres (>= instead of >). This corrects the 2x2 rule in the filters.