mskcc / neoantigen-pipeline

Pipeline for computing neoantigen qualities from DNA and RNA-Seq data
MIT License
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Neoantigen input to greenbaum tools #8

Closed nikhil closed 7 months ago

nikhil commented 7 months ago

Poly solver can replace optitype What is the diffrence between netmhc and netmhcpan (used by Tempo)?

nikhil commented 7 months ago

After gathering some input, it looks like netmhcpan is newer and better