Closed rhshah closed 5 years ago
I am going to give Distance between features (-d
) as 300
default and at the same time, provide user the option of entering any other value. Let me know if that default needs to be modified
I think we don't need to provide any default. I just thought of giving 400
as if the features are that far apart they get merged as abra2 operated on the window size of 400
. But we can run it without any -d
option.
version: 2.28
location: https://github.com/arq5x/bedtools2/releases/download/v2.28.0/bedtools
bedtools merge -i out.bedgraph -d 400 > out.bed