mskcc / facets

Algorithm to implement Fraction and Copy number Estimate from Tumor/normal Sequencing.
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Yes "cnlr.median - dipLogR" is the log(total copy number) unadjusted for purity which is what you want. #167

Closed qindan2008 closed 3 years ago

qindan2008 commented 3 years ago

Yes "cnlr.median - dipLogR" is the log(total copy number) unadjusted for purity which is what you want.

Originally posted by @veseshan in https://github.com/mskcc/facets/issues/84#issuecomment-392079533