nextflow module for phylo_wgs write_results

mskcc / neoantigen-pipeline

Pipeline for computing neoantigen qualities from DNA and RNA-Seq data

MIT License

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nextflow module for phylo_wgs write_results #14

Closed nikhil closed 7 months ago

nikhil commented 8 months ago

Dockerhub Container: mskcc/phylowgs:v1.3-msk command: /usr/local/bin/python2 /usr/bin/write_results.py --include-ssm-names [project_name] [ chains/trees.zip from miltievolve] [project_name].summ.json.gz [project_name].muts.json.gz [project_name].mutass.zip output: [project_name].summ.json.gz [project_name].muts.json.gz [project_name].mutass.zip