Remove --af_esp for compatibility with v107 ensemble

mskcc / vcf2maf

Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms

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Remove --af_esp for compatibility with v107 ensemble #328

Closed allaway closed 2 years ago

allaway commented 2 years ago

I am opening this PR in reference to #322. I don't have a deep understanding of ensemble and even less of perl, so there's possibly a better way to do this that faciliates backwards-compatibility, if it is necessary.

allaway commented 2 years ago

I should have checked - I see the exact same change in #324.