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mskcc / vcf2maf

Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms
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cosmic annotation #345

Open me-nobody opened 1 year ago

me-nobody commented 1 year ago

Hi, I want the maf output to be annotated with COSV/COSM ids. but using the default options, the output was not annotated with cosmic ids. what is the command equivalent of vep --everything? BW