mskilab-org / dryclean

Irons out wrinkles in noisy coverage data using robust PCA
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more robust approach to mismatched bin number #30

Closed sebastian-brylka closed 8 months ago

sebastian-brylka commented 8 months ago

if the seqlengths of coverage and PON do not match, instead of breaking the program, we use gr.val function with PON template as a query to match the dimensions of the coverage with the PON

updated tutorial to explicitly say that we should use raw reads for pon generation