msraredon / NICHES

Niche Interactions and Cellular Heterogeneity in Extracellular Signaling
https://msraredon.github.io/NICHES/
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Subset of Seurat object #47

Open mvereten opened 1 month ago

mvereten commented 1 month ago

Dear NICHES team,

When I run the RunNICHES function on the wholde Seurat object, everything is ok, byt when I subset to a group of cells using specific fov's only, the function fails with the error as below: image

Is this something yuou could comment on?

Many thanks, Maria