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msys2 / MINGW-packages

Package scripts for MinGW-w64 targets to build under MSYS2.
https://packages.msys2.org
BSD 3-Clause "New" or "Revised" License
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Oct 2019 upgrade: pip upgrade failure #5844

Closed sdbbs closed 4 years ago

sdbbs commented 5 years ago

Tried to update today (7 0ct 2019); First mintty upgraded during core system upgrade, it was fine; then everything halted at the next step, see transcript below. I guess this is a bit of showstopper - any advice what I could do?

$ pacman -Syu
:: Synchronizing package databases...
 mingw32 is up to date
 mingw64 is up to date
 msys is up to date
:: Starting core system upgrade...
 there is nothing to do
:: Starting full system upgrade...
resolving dependencies...
looking for conflicting packages...

Packages (17) dtc-1.5.1-1  mingw-w64-x86_64-adwaita-icon-theme-3.34.0-1
              mingw-w64-x86_64-boost-1.71.0-1  mingw-w64-x86_64-fribidi-1.0.7-1
              mingw-w64-x86_64-gdb-8.3.1-1  mingw-w64-x86_64-glib2-2.62.1-1
              mingw-w64-x86_64-gtk3-3.24.12-1  mingw-w64-x86_64-libogg-1.3.4-2
              mingw-w64-x86_64-shared-mime-info-1.14-1
              mingw-w64-x86_64-sqlite3-3.30.0-1  pkgfile-20-1
              python2-packaging-19.2-1  python2-pip-19.2.3-1
              python2-setuptools-41.2.0-1  python3-packaging-19.2-1
              python3-pip-19.2.3-1  python3-setuptools-41.2.0-1

Total Download Size:    60.94 MiB
Total Installed Size:  534.20 MiB
Net Upgrade Size:        8.50 MiB

:: Proceed with installation? [Y/n] y
:: Retrieving packages...
 mingw-w64-x86_64-sq...     6.6 MiB  1390K/s 00:05 [#####################] 100%
 mingw-w64-x86_64-gl...     4.6 MiB  2.51M/s 00:02 [#####################] 100%
 mingw-w64-x86_64-fr...    94.2 KiB  0.00B/s 00:00 [#####################] 100%
 mingw-w64-x86_64-ad...    12.2 MiB  2.00M/s 00:06 [#####################] 100%
 mingw-w64-x86_64-bo...    21.5 MiB  2.81M/s 00:08 [#####################] 100%
 mingw-w64-x86_64-gd...     3.5 MiB  5.33M/s 00:01 [#####################] 100%
 mingw-w64-x86_64-sh...   533.0 KiB  11.1M/s 00:00 [#####################] 100%
 mingw-w64-x86_64-gt...     7.5 MiB  6.07M/s 00:01 [#####################] 100%
 mingw-w64-x86_64-li...   229.6 KiB  14.0M/s 00:00 [#####################] 100%
 dtc-1.5.1-1-x86_64       140.3 KiB  4.42M/s 00:00 [#####################] 100%
 pkgfile-20-1-x86_64       42.8 KiB  0.00B/s 00:00 [#####################] 100%
 python2-packaging-1...    57.1 KiB  3.49M/s 00:00 [#####################] 100%
 python2-setuptools-...   429.3 KiB  13.5M/s 00:00 [#####################] 100%
 python2-pip-19.2.3-...  1618.1 KiB  5.06M/s 00:00 [#####################] 100%
 python3-packaging-1...    57.5 KiB  0.00B/s 00:00 [#####################] 100%
 python3-setuptools-...   454.1 KiB  13.9M/s 00:00 [#####################] 100%
 python3-pip-19.2.3-...  1602.4 KiB  7.71M/s 00:00 [#####################] 100%
(17/17) checking keys in keyring                   [#####################] 100%
(17/17) checking package integrity                 [#####################] 100%
(17/17) loading package files                      [#####################] 100%
(17/17) checking for file conflicts                [#####################] 100%
error: failed to commit transaction (conflicting files)
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/commands/debug.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/commands/debug.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/distributions/__init__.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/distributions/__init__.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/distributions/base.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/distributions/base.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/distributions/installed.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/distributions/installed.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/distributions/source.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/distributions/source.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/distributions/wheel.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/distributions/wheel.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/legacy_resolve.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/legacy_resolve.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/models/search_scope.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/models/search_scope.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/models/selection_prefs.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/models/selection_prefs.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/models/target_python.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/models/target_python.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/utils/marker_files.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/utils/marker_files.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/utils/virtualenv.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/utils/virtualenv.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/vcs/versioncontrol.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_internal/vcs/versioncontrol.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/__init__.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/__init__.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/_mixin.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/_mixin.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/abnf_regexp.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/abnf_regexp.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/api.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/api.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/builder.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/builder.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/compat.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/compat.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/exceptions.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/exceptions.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/iri.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/iri.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/misc.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/misc.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/normalizers.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/normalizers.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/parseresult.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/parseresult.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/uri.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/uri.pyc exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/validators.py exists in filesystem
python2-pip: /c/msys64/usr/lib/python2.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/validators.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/__pycache__/legacy_resolve.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/commands/__pycache__/debug.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/commands/debug.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/distributions/__init__.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/distributions/__pycache__/__init__.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/distributions/__pycache__/base.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/distributions/__pycache__/installed.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/distributions/__pycache__/source.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/distributions/__pycache__/wheel.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/distributions/base.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/distributions/installed.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/distributions/source.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/distributions/wheel.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/legacy_resolve.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/models/__pycache__/search_scope.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/models/__pycache__/selection_prefs.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/models/__pycache__/target_python.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/models/search_scope.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/models/selection_prefs.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/models/target_python.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/utils/__pycache__/marker_files.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/utils/__pycache__/virtualenv.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/utils/marker_files.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/utils/virtualenv.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/vcs/__pycache__/versioncontrol.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_internal/vcs/versioncontrol.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/__init__.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/__pycache__/__init__.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/__pycache__/_mixin.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/__pycache__/abnf_regexp.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/__pycache__/api.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/__pycache__/builder.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/__pycache__/compat.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/__pycache__/exceptions.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/__pycache__/iri.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/__pycache__/misc.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/__pycache__/normalizers.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/__pycache__/parseresult.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/__pycache__/uri.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/__pycache__/validators.cpython-37.pyc exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/_mixin.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/abnf_regexp.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/api.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/builder.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/compat.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/exceptions.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/iri.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/misc.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/normalizers.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/parseresult.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/uri.py exists in filesystem
python3-pip: /c/msys64/usr/lib/python3.7/site-packages/pip/_vendor/urllib3/packages/rfc3986/validators.py exists in filesystem
Errors occurred, no packages were upgraded.
sdbbs commented 5 years ago

Here's a workaround - first, put all offending files in a tar archive, such that the originals are deleted ( see also https://unix.stackexchange.com/questions/545677/using-tar-to-update-archive-with-files-from-a-while-loop ):

$ pacman -Syu | grep exists | awk '{print $2}' | sed 's_/d/__' | xargs tar --remove-files -cvf /tmp/bckp.tar -C /d/
:: Proceed with installation? [Y/n] y
error: failed to commit transaction (conflicting files)
msys64/usr/lib/python2.7/site-packages/pip/_internal/commands/debug.py
msys64/usr/lib/python2.7/site-packages/pip/_internal/commands/debug.pyc
msys64/usr/lib/python2.7/site-packages/pip/_internal/distributions/__init__.py
msys64/usr/lib/python2.7/site-packages/pip/_internal/distributions/__init__.pyc
...

Then, re-run the update, it should pass: (and after it, if there are some of the offending files missing from some package, at least we have them saved in the /tmp/bckp.tar file, from where we could restore them)

$ pacman -Syu
:: Synchronizing package databases...
 mingw32 is up to date
 mingw64 is up to date
 msys is up to date
:: Starting core system upgrade...
 there is nothing to do
:: Starting full system upgrade...
resolving dependencies...
looking for conflicting packages...

Packages (18) dtc-1.5.1-1  mingw-w64-x86_64-adwaita-icon-theme-3.34.0-1
              mingw-w64-x86_64-boost-1.71.0-1  mingw-w64-x86_64-fribidi-1.0.7-1
              mingw-w64-x86_64-gdb-8.3.1-1  mingw-w64-x86_64-glib2-2.62.1-2
              mingw-w64-x86_64-gnutls-3.6.10-1  mingw-w64-x86_64-gtk3-3.24.12-1
              mingw-w64-x86_64-libogg-1.3.4-2
              mingw-w64-x86_64-shared-mime-info-1.14-1
              mingw-w64-x86_64-sqlite3-3.30.0-1  pkgfile-20-1
              python2-packaging-19.2-1  python2-pip-19.2.3-1
              python2-setuptools-41.2.0-1  python3-packaging-19.2-1
              python3-pip-19.2.3-1  python3-setuptools-41.2.0-1

Total Installed Size:  546.47 MiB
Net Upgrade Size:        8.92 MiB

:: Proceed with installation? [Y/n] y
(18/18) checking keys in keyring                   [#####################] 100%
(18/18) checking package integrity                 [#####################] 100%
(18/18) loading package files                      [#####################] 100%
(18/18) checking for file conflicts                [#####################] 100%
(18/18) checking available disk space              [#####################] 100%
warning: could not get file information for usr/lib/python2.7/site-packages/pip-19.1-py2.7.egg-info/
warning: could not get file information for usr/lib/python2.7/site-packages/pip-19.1-py2.7.egg-info/dependency_links.txt
warning: could not get file information for usr/lib/python2.7/site-packages/pip-19.1-py2.7.egg-info/entry_points.txt
warning: could not get file information for usr/lib/python2.7/site-packages/pip-19.1-py2.7.egg-info/not-zip-safe
warning: could not get file information for usr/lib/python2.7/site-packages/pip-19.1-py2.7.egg-info/PKG-INFO
warning: could not get file information for usr/lib/python2.7/site-packages/pip-19.1-py2.7.egg-info/SOURCES.txt
warning: could not get file information for usr/lib/python2.7/site-packages/pip-19.1-py2.7.egg-info/top_level.txt
warning: could not get file information for usr/lib/python2.7/site-packages/pip/_internal/resolve.py
warning: could not get file information for usr/lib/python2.7/site-packages/pip/_internal/resolve.pyc
warning: could not get file information for usr/lib/python3.7/site-packages/pip-19.1-py3.7.egg-info/
warning: could not get file information for usr/lib/python3.7/site-packages/pip-19.1-py3.7.egg-info/dependency_links.txt
warning: could not get file information for usr/lib/python3.7/site-packages/pip-19.1-py3.7.egg-info/entry_points.txt
warning: could not get file information for usr/lib/python3.7/site-packages/pip-19.1-py3.7.egg-info/not-zip-safe
warning: could not get file information for usr/lib/python3.7/site-packages/pip-19.1-py3.7.egg-info/PKG-INFO
warning: could not get file information for usr/lib/python3.7/site-packages/pip-19.1-py3.7.egg-info/SOURCES.txt
warning: could not get file information for usr/lib/python3.7/site-packages/pip-19.1-py3.7.egg-info/top_level.txt
warning: could not get file information for usr/lib/python3.7/site-packages/pip/_internal/__pycache__/resolve.cpython-37.pyc
warning: could not get file information for usr/lib/python3.7/site-packages/pip/_internal/resolve.py
:: Processing package changes...
( 1/18) upgrading dtc                              [#####################] 100%
( 2/18) upgrading mingw-w64-x86_64-sqlite3         [#####################] 100%
( 3/18) upgrading mingw-w64-x86_64-glib2           [#####################] 100%
Warning: Schema “org.gnome.system.locale” has path “/system/locale/”.  Paths starting with “/apps/”, “/desktop/” or “/system/” are deprecated.
Warning: Schema “org.gnome.system.proxy” has path “/system/proxy/”.  Paths starting with “/apps/”, “/desktop/” or “/system/” are deprecated.
Warning: Schema “org.gnome.system.proxy.http” has path “/system/proxy/http/”.  Paths starting with “/apps/”, “/desktop/” or “/system/” are deprecated.
Warning: Schema “org.gnome.system.proxy.https” has path “/system/proxy/https/”.  Paths starting with “/apps/”, “/desktop/” or “/system/” are deprecated.
Warning: Schema “org.gnome.system.proxy.ftp” has path “/system/proxy/ftp/”.  Paths starting with “/apps/”, “/desktop/” or “/system/” are deprecated.
Warning: Schema “org.gnome.system.proxy.socks” has path “/system/proxy/socks/”.  Paths starting with “/apps/”, “/desktop/” or “/system/” are deprecated.
/
( 4/18) upgrading mingw-w64-x86_64-fribidi         [#####################] 100%
( 5/18) upgrading mingw-w64-x86_64-adwaita-ico...  [#####################] 100%
( 6/18) upgrading mingw-w64-x86_64-boost           [#####################] 100%
( 7/18) upgrading mingw-w64-x86_64-gdb             [#####################] 100%
( 8/18) upgrading mingw-w64-x86_64-gnutls          [#####################] 100%
( 9/18) upgrading mingw-w64-x86_64-shared-mime...  [#####################] 100%
(10/18) upgrading mingw-w64-x86_64-gtk3            [#####################] 100%
Warning: Schema “org.gnome.system.locale” has path “/system/locale/”.  Paths starting with “/apps/”, “/desktop/” or “/system/” are deprecated.
Warning: Schema “org.gnome.system.proxy” has path “/system/proxy/”.  Paths starting with “/apps/”, “/desktop/” or “/system/” are deprecated.
Warning: Schema “org.gnome.system.proxy.http” has path “/system/proxy/http/”.  Paths starting with “/apps/”, “/desktop/” or “/system/” are deprecated.
Warning: Schema “org.gnome.system.proxy.https” has path “/system/proxy/https/”.  Paths starting with “/apps/”, “/desktop/” or “/system/” are deprecated.
Warning: Schema “org.gnome.system.proxy.ftp” has path “/system/proxy/ftp/”.  Paths starting with “/apps/”, “/desktop/” or “/system/” are deprecated.
Warning: Schema “org.gnome.system.proxy.socks” has path “/system/proxy/socks/”.  Paths starting with “/apps/”, “/desktop/” or “/system/” are deprecated.
(11/18) upgrading mingw-w64-x86_64-libogg          [#####################] 100%
(12/18) upgrading pkgfile                          [#####################] 100%
(13/18) upgrading python2-packaging                [#####################] 100%
(14/18) upgrading python2-setuptools               [#####################] 100%
(15/18) upgrading python2-pip                      [#####################] 100%
(16/18) upgrading python3-packaging                [#####################] 100%
(17/18) upgrading python3-setuptools               [#####################] 100%
(18/18) upgrading python3-pip                      [#####################] 100%
lazka commented 4 years ago

Two ways to handle such problems: pass --overwrite '**' to pacman to force override the files and reinstall packages to get rid of the "could not get file information.." warnings.

The main causes of this happening are:

lazka commented 4 years ago

I hope the workaround above works for you. Closing as I don't know what we could do here.