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mtsch / Ripserer.jl

Flexible and efficient persistent homology computation.
https://mtsch.github.io/Ripserer.jl/dev/
MIT License
66 stars 8 forks source link

Docs updates, add `midlife` #139

Closed mtsch closed 3 years ago

github-actions[bot] commented 3 years ago
Benchmark result # Judge result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmarks: - Target: 11 Dec 2020 - 07:54 - Baseline: 11 Dec 2020 - 07:58 * Package commits: - Target: 9031f8 - Baseline: a2311f * Julia commits: - Target: 788b2c - Baseline: 788b2c * Julia command flags: - Target: None - Baseline: None * Environment variables: - Target: None - Baseline: None ## Results A ratio greater than `1.0` denotes a possible regression (marked with :x:), while a ratio less than `1.0` denotes a possible improvement (marked with :white_check_mark:). Only significant results - results that indicate possible regressions or improvements - are shown below (thus, an empty table means that all benchmark results remained invariant between builds). | ID | time ratio | memory ratio | |----------------------------------------------------|---------------|--------------| | `["rips", "sparse", "dragon2000.pts"]` | 1.06 (5%) :x: | 1.00 (1%) | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ### Target ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 14083 s 0 s 1999 s 22934 s 0 s #2 2095 MHz 19179 s 0 s 2134 s 17444 s 0 s Memory: 6.791393280029297 GB (2751.5078125 MB free) Uptime: 408.0 sec Load Avg: 1.005859375 0.8701171875 0.45458984375 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` ### Baseline ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 14875 s 0 s 2250 s 41100 s 0 s #2 2095 MHz 37382 s 0 s 2686 s 17916 s 0 s Memory: 6.791393280029297 GB (2660.90234375 MB free) Uptime: 600.0 sec Load Avg: 1.0126953125 0.95849609375 0.57177734375 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Target result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmark: 11 Dec 2020 - 7:54 * Package commit: 9031f8 * Julia commit: 788b2c * Julia command flags: None * Environment variables: None ## Results Below is a table of this job's results, obtained by running the benchmarks. The values listed in the `ID` column have the structure `[parent_group, child_group, ..., key]`, and can be used to index into the BaseBenchmarks suite to retrieve the corresponding benchmarks. The percentages accompanying time and memory values in the below table are noise tolerances. The "true" time/memory value for a given benchmark is expected to fall within this percentage of the reported value. An empty cell means that the value was zero. | ID | time | GC time | memory | allocations | |----------------------------------------------------|--------------:|-----------:|----------------:|------------:| | `["alpha", "klein500.pts"]` | 17.852 s (5%) | 680.387 ms | 3.62 GiB (1%) | 33591894 | | `["alpha", "torus10k.pts"]` | 4.988 s (5%) | 100.958 ms | 1.11 GiB (1%) | 10857188 | | `["cubical", "bonsai64.dipha"]` | 5.800 s (5%) | 92.716 ms | 708.59 MiB (1%) | 12168410 | | `["cubical", "lena2048.dipha"]` | 7.887 s (5%) | 438.970 ms | 2.36 GiB (1%) | 27759516 | | `["homology", "klein200.pts"]` | 1.452 s (5%) | | 47.89 MiB (1%) | 834276 | | `["homology", "lena1024.dipha"]` | 6.023 s (5%) | 212.450 ms | 763.76 MiB (1%) | 11518344 | | `["homology", "sphere100.pts"]` | 1.248 s (5%) | 9.700 ms | 90.28 MiB (1%) | 1062423 | | `["rips", "dense", "dragon2000.pts"]` | 2.517 s (5%) | 33.845 ms | 292.72 MiB (1%) | 52255 | | `["rips", "dense", "fract-r.dist"]` | 18.655 s (5%) | 274.122 ms | 1.79 GiB (1%) | 108875 | | `["rips", "dense", "o3_1024.pts"]` | 5.678 s (5%) | 48.475 ms | 478.09 MiB (1%) | 2912222 | | `["rips", "sparse", "alpha_4_sphere_2000.spdist"]` | 8.079 s (5%) | 55.069 ms | 575.70 MiB (1%) | 3751760 | | `["rips", "sparse", "dragon2000.pts"]` | 2.846 s (5%) | 8.210 ms | 322.51 MiB (1%) | 37826 | | `["rips", "sparse", "fract-r.dist"]` | 21.369 s (5%) | 287.807 ms | 1.79 GiB (1%) | 97740 | | `["rips", "sparse", "o3_1024.pts"]` | 2.612 s (5%) | 12.225 ms | 337.97 MiB (1%) | 137110 | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 14083 s 0 s 1999 s 22934 s 0 s #2 2095 MHz 19179 s 0 s 2134 s 17444 s 0 s Memory: 6.791393280029297 GB (2751.5078125 MB free) Uptime: 408.0 sec Load Avg: 1.005859375 0.8701171875 0.45458984375 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Baseline result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmark: 11 Dec 2020 - 7:58 * Package commit: a2311f * Julia commit: 788b2c * Julia command flags: None * Environment variables: None ## Results Below is a table of this job's results, obtained by running the benchmarks. The values listed in the `ID` column have the structure `[parent_group, child_group, ..., key]`, and can be used to index into the BaseBenchmarks suite to retrieve the corresponding benchmarks. The percentages accompanying time and memory values in the below table are noise tolerances. The "true" time/memory value for a given benchmark is expected to fall within this percentage of the reported value. An empty cell means that the value was zero. | ID | time | GC time | memory | allocations | |----------------------------------------------------|--------------:|-----------:|----------------:|------------:| | `["alpha", "klein500.pts"]` | 17.816 s (5%) | 658.279 ms | 3.62 GiB (1%) | 33591898 | | `["alpha", "torus10k.pts"]` | 4.984 s (5%) | 110.451 ms | 1.11 GiB (1%) | 10857189 | | `["cubical", "bonsai64.dipha"]` | 5.592 s (5%) | 92.498 ms | 708.59 MiB (1%) | 12168409 | | `["cubical", "lena2048.dipha"]` | 8.053 s (5%) | 453.646 ms | 2.36 GiB (1%) | 27759518 | | `["homology", "klein200.pts"]` | 1.443 s (5%) | | 47.89 MiB (1%) | 834275 | | `["homology", "lena1024.dipha"]` | 6.012 s (5%) | 229.068 ms | 763.77 MiB (1%) | 11518345 | | `["homology", "sphere100.pts"]` | 1.294 s (5%) | 9.840 ms | 90.28 MiB (1%) | 1062423 | | `["rips", "dense", "dragon2000.pts"]` | 2.639 s (5%) | 34.340 ms | 292.72 MiB (1%) | 52255 | | `["rips", "dense", "fract-r.dist"]` | 18.481 s (5%) | 280.785 ms | 1.79 GiB (1%) | 108875 | | `["rips", "dense", "o3_1024.pts"]` | 5.481 s (5%) | 47.935 ms | 478.08 MiB (1%) | 2912221 | | `["rips", "sparse", "alpha_4_sphere_2000.spdist"]` | 8.448 s (5%) | 60.030 ms | 575.70 MiB (1%) | 3751759 | | `["rips", "sparse", "dragon2000.pts"]` | 2.695 s (5%) | 8.151 ms | 322.51 MiB (1%) | 37826 | | `["rips", "sparse", "fract-r.dist"]` | 20.508 s (5%) | 288.805 ms | 1.79 GiB (1%) | 97740 | | `["rips", "sparse", "o3_1024.pts"]` | 2.685 s (5%) | 12.504 ms | 337.97 MiB (1%) | 137110 | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 14875 s 0 s 2250 s 41100 s 0 s #2 2095 MHz 37382 s 0 s 2686 s 17916 s 0 s Memory: 6.791393280029297 GB (2660.90234375 MB free) Uptime: 600.0 sec Load Avg: 1.0126953125 0.95849609375 0.57177734375 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Runtime information | Runtime Info | | |:--|:--| | BLAS #threads | 2 | | `BLAS.vendor()` | `openblas64` | | `Sys.CPU_THREADS` | 2 | `lscpu` output: Architecture: x86_64 CPU op-mode(s): 32-bit, 64-bit Byte Order: Little Endian CPU(s): 2 On-line CPU(s) list: 0,1 Thread(s) per core: 1 Core(s) per socket: 2 Socket(s): 1 NUMA node(s): 1 Vendor ID: GenuineIntel CPU family: 6 Model: 85 Model name: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz Stepping: 4 CPU MHz: 2095.102 BogoMIPS: 4190.20 Hypervisor vendor: Microsoft Virtualization type: full L1d cache: 32K L1i cache: 32K L2 cache: 1024K L3 cache: 36608K NUMA node0 CPU(s): 0,1 Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl xtopology cpuid pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch invpcid_single pti fsgsbase bmi1 hle avx2 smep bmi2 erms invpcid rtm mpx avx512f avx512dq rdseed adx smap clflushopt avx512cd avx512bw avx512vl xsaveopt xsavec xsaves md_clear | Cpu Property | Value | |:------------------ |:------------------------------------------------------- | | Brand | Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz | | Vendor | :Intel | | Architecture | :Skylake | | Model | Family: 0x06, Model: 0x55, Stepping: 0x04, Type: 0x00 | | Cores | 2 physical cores, 2 logical cores (on executing CPU) | | | No Hyperthreading detected | | Clock Frequencies | Not supported by CPU | | Data Cache | Level 1:3 : (32, 1024, 36608) kbytes | | | 64 byte cache line size | | Address Size | 48 bits virtual, 46 bits physical | | SIMD | 512 bit = 64 byte max. SIMD vector size | | Time Stamp Counter | TSC is accessible via `rdtsc` | | | TSC increased at every clock cycle (non-invariant TSC) | | Perf. Monitoring | Performance Monitoring Counters (PMC) are not supported | | Hypervisor | Yes, Microsoft |
github-actions[bot] commented 3 years ago
Benchmark result # Judge result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmarks: - Target: 11 Dec 2020 - 08:30 - Baseline: 11 Dec 2020 - 08:34 * Package commits: - Target: d2e6c9 - Baseline: a2311f * Julia commits: - Target: 788b2c - Baseline: 788b2c * Julia command flags: - Target: None - Baseline: None * Environment variables: - Target: None - Baseline: None ## Results A ratio greater than `1.0` denotes a possible regression (marked with :x:), while a ratio less than `1.0` denotes a possible improvement (marked with :white_check_mark:). Only significant results - results that indicate possible regressions or improvements - are shown below (thus, an empty table means that all benchmark results remained invariant between builds). | ID | time ratio | memory ratio | |----------------------------------------------------|------------|--------------| ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ### Target ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 27290 s 0 s 2238 s 10935 s 0 s #2 2095 MHz 8996 s 0 s 2114 s 29059 s 0 s Memory: 6.791393280029297 GB (2785.71875 MB free) Uptime: 420.0 sec Load Avg: 1.06494140625 0.8623046875 0.44189453125 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` ### Baseline ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 37761 s 0 s 2545 s 21095 s 0 s #2 2095 MHz 19239 s 0 s 2672 s 39201 s 0 s Memory: 6.791393280029297 GB (2766.921875 MB free) Uptime: 630.0 sec Load Avg: 1.06884765625 0.97216796875 0.5751953125 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Target result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmark: 11 Dec 2020 - 8:30 * Package commit: d2e6c9 * Julia commit: 788b2c * Julia command flags: None * Environment variables: None ## Results Below is a table of this job's results, obtained by running the benchmarks. The values listed in the `ID` column have the structure `[parent_group, child_group, ..., key]`, and can be used to index into the BaseBenchmarks suite to retrieve the corresponding benchmarks. The percentages accompanying time and memory values in the below table are noise tolerances. The "true" time/memory value for a given benchmark is expected to fall within this percentage of the reported value. An empty cell means that the value was zero. | ID | time | GC time | memory | allocations | |----------------------------------------------------|--------------:|-----------:|----------------:|------------:| | `["alpha", "klein500.pts"]` | 19.905 s (5%) | 725.689 ms | 3.62 GiB (1%) | 33591892 | | `["alpha", "torus10k.pts"]` | 5.622 s (5%) | 108.666 ms | 1.11 GiB (1%) | 10857184 | | `["cubical", "bonsai64.dipha"]` | 6.269 s (5%) | 95.329 ms | 708.59 MiB (1%) | 12168411 | | `["cubical", "lena2048.dipha"]` | 8.686 s (5%) | 467.111 ms | 2.36 GiB (1%) | 27759516 | | `["homology", "klein200.pts"]` | 1.624 s (5%) | | 47.89 MiB (1%) | 834277 | | `["homology", "lena1024.dipha"]` | 6.716 s (5%) | 233.290 ms | 763.76 MiB (1%) | 11518343 | | `["homology", "sphere100.pts"]` | 1.419 s (5%) | 10.313 ms | 90.28 MiB (1%) | 1062418 | | `["rips", "dense", "dragon2000.pts"]` | 2.846 s (5%) | 33.396 ms | 292.72 MiB (1%) | 52255 | | `["rips", "dense", "fract-r.dist"]` | 20.252 s (5%) | 289.696 ms | 1.79 GiB (1%) | 108875 | | `["rips", "dense", "o3_1024.pts"]` | 6.271 s (5%) | 49.834 ms | 478.09 MiB (1%) | 2912173 | | `["rips", "sparse", "alpha_4_sphere_2000.spdist"]` | 9.100 s (5%) | 59.060 ms | 575.70 MiB (1%) | 3751758 | | `["rips", "sparse", "dragon2000.pts"]` | 3.112 s (5%) | 7.953 ms | 322.51 MiB (1%) | 37826 | | `["rips", "sparse", "fract-r.dist"]` | 22.330 s (5%) | 296.519 ms | 1.79 GiB (1%) | 97740 | | `["rips", "sparse", "o3_1024.pts"]` | 2.943 s (5%) | 12.309 ms | 337.97 MiB (1%) | 137110 | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 27290 s 0 s 2238 s 10935 s 0 s #2 2095 MHz 8996 s 0 s 2114 s 29059 s 0 s Memory: 6.791393280029297 GB (2785.71875 MB free) Uptime: 420.0 sec Load Avg: 1.06494140625 0.8623046875 0.44189453125 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Baseline result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmark: 11 Dec 2020 - 8:34 * Package commit: a2311f * Julia commit: 788b2c * Julia command flags: None * Environment variables: None ## Results Below is a table of this job's results, obtained by running the benchmarks. The values listed in the `ID` column have the structure `[parent_group, child_group, ..., key]`, and can be used to index into the BaseBenchmarks suite to retrieve the corresponding benchmarks. The percentages accompanying time and memory values in the below table are noise tolerances. The "true" time/memory value for a given benchmark is expected to fall within this percentage of the reported value. An empty cell means that the value was zero. | ID | time | GC time | memory | allocations | |----------------------------------------------------|--------------:|-----------:|----------------:|------------:| | `["alpha", "klein500.pts"]` | 19.694 s (5%) | 685.533 ms | 3.62 GiB (1%) | 33591887 | | `["alpha", "torus10k.pts"]` | 5.607 s (5%) | 109.000 ms | 1.11 GiB (1%) | 10857184 | | `["cubical", "bonsai64.dipha"]` | 6.261 s (5%) | 96.081 ms | 708.59 MiB (1%) | 12168410 | | `["cubical", "lena2048.dipha"]` | 8.732 s (5%) | 472.445 ms | 2.36 GiB (1%) | 27759512 | | `["homology", "klein200.pts"]` | 1.614 s (5%) | | 47.89 MiB (1%) | 834276 | | `["homology", "lena1024.dipha"]` | 6.571 s (5%) | 232.903 ms | 763.77 MiB (1%) | 11518344 | | `["homology", "sphere100.pts"]` | 1.391 s (5%) | 10.448 ms | 90.28 MiB (1%) | 1062423 | | `["rips", "dense", "dragon2000.pts"]` | 2.761 s (5%) | 34.245 ms | 292.72 MiB (1%) | 52255 | | `["rips", "dense", "fract-r.dist"]` | 19.926 s (5%) | 290.315 ms | 1.79 GiB (1%) | 108875 | | `["rips", "dense", "o3_1024.pts"]` | 6.228 s (5%) | 49.556 ms | 478.11 MiB (1%) | 2912185 | | `["rips", "sparse", "alpha_4_sphere_2000.spdist"]` | 9.021 s (5%) | 59.020 ms | 575.69 MiB (1%) | 3751753 | | `["rips", "sparse", "dragon2000.pts"]` | 3.080 s (5%) | 8.013 ms | 322.51 MiB (1%) | 37826 | | `["rips", "sparse", "fract-r.dist"]` | 22.159 s (5%) | 293.480 ms | 1.79 GiB (1%) | 97740 | | `["rips", "sparse", "o3_1024.pts"]` | 2.940 s (5%) | 12.245 ms | 337.97 MiB (1%) | 137110 | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 37761 s 0 s 2545 s 21095 s 0 s #2 2095 MHz 19239 s 0 s 2672 s 39201 s 0 s Memory: 6.791393280029297 GB (2766.921875 MB free) Uptime: 630.0 sec Load Avg: 1.06884765625 0.97216796875 0.5751953125 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Runtime information | Runtime Info | | |:--|:--| | BLAS #threads | 2 | | `BLAS.vendor()` | `openblas64` | | `Sys.CPU_THREADS` | 2 | `lscpu` output: Architecture: x86_64 CPU op-mode(s): 32-bit, 64-bit Byte Order: Little Endian CPU(s): 2 On-line CPU(s) list: 0,1 Thread(s) per core: 1 Core(s) per socket: 2 Socket(s): 1 NUMA node(s): 1 Vendor ID: GenuineIntel CPU family: 6 Model: 85 Model name: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz Stepping: 4 CPU MHz: 2095.209 BogoMIPS: 4190.41 Hypervisor vendor: Microsoft Virtualization type: full L1d cache: 32K L1i cache: 32K L2 cache: 1024K L3 cache: 36608K NUMA node0 CPU(s): 0,1 Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl xtopology cpuid pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch invpcid_single pti fsgsbase bmi1 hle avx2 smep bmi2 erms invpcid rtm mpx avx512f avx512dq rdseed adx smap clflushopt avx512cd avx512bw avx512vl xsaveopt xsavec xsaves md_clear | Cpu Property | Value | |:------------------ |:------------------------------------------------------- | | Brand | Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz | | Vendor | :Intel | | Architecture | :Skylake | | Model | Family: 0x06, Model: 0x55, Stepping: 0x04, Type: 0x00 | | Cores | 2 physical cores, 2 logical cores (on executing CPU) | | | No Hyperthreading detected | | Clock Frequencies | Not supported by CPU | | Data Cache | Level 1:3 : (32, 1024, 36608) kbytes | | | 64 byte cache line size | | Address Size | 48 bits virtual, 46 bits physical | | SIMD | 512 bit = 64 byte max. SIMD vector size | | Time Stamp Counter | TSC is accessible via `rdtsc` | | | TSC increased at every clock cycle (non-invariant TSC) | | Perf. Monitoring | Performance Monitoring Counters (PMC) are not supported | | Hypervisor | Yes, Microsoft |
github-actions[bot] commented 3 years ago
Benchmark result # Judge result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmarks: - Target: 11 Dec 2020 - 09:32 - Baseline: 11 Dec 2020 - 09:36 * Package commits: - Target: 9dcdd3 - Baseline: a2311f * Julia commits: - Target: 788b2c - Baseline: 788b2c * Julia command flags: - Target: None - Baseline: None * Environment variables: - Target: None - Baseline: None ## Results A ratio greater than `1.0` denotes a possible regression (marked with :x:), while a ratio less than `1.0` denotes a possible improvement (marked with :white_check_mark:). Only significant results - results that indicate possible regressions or improvements - are shown below (thus, an empty table means that all benchmark results remained invariant between builds). | ID | time ratio | memory ratio | |----------------------------------------------------|---------------|--------------| | `["homology", "klein200.pts"]` | 1.06 (5%) :x: | 1.00 (1%) | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ### Target ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) CPU E5-2673 v4 @ 2.30GHz: speed user nice sys idle irq #1 2294 MHz 12722 s 0 s 1926 s 31502 s 0 s #2 2294 MHz 29144 s 0 s 2356 s 14827 s 0 s Memory: 6.791393280029297 GB (2732.8984375 MB free) Uptime: 482.0 sec Load Avg: 1.0380859375 0.97607421875 0.5537109375 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, broadwell) ``` ### Baseline ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) CPU E5-2673 v4 @ 2.30GHz: speed user nice sys idle irq #1 2294 MHz 24957 s 0 s 2250 s 43235 s 0 s #2 2294 MHz 40750 s 0 s 2742 s 27126 s 0 s Memory: 6.791393280029297 GB (2709.95703125 MB free) Uptime: 725.0 sec Load Avg: 1.0 0.99951171875 0.6640625 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, broadwell) ``` --- # Target result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmark: 11 Dec 2020 - 9:32 * Package commit: 9dcdd3 * Julia commit: 788b2c * Julia command flags: None * Environment variables: None ## Results Below is a table of this job's results, obtained by running the benchmarks. The values listed in the `ID` column have the structure `[parent_group, child_group, ..., key]`, and can be used to index into the BaseBenchmarks suite to retrieve the corresponding benchmarks. The percentages accompanying time and memory values in the below table are noise tolerances. The "true" time/memory value for a given benchmark is expected to fall within this percentage of the reported value. An empty cell means that the value was zero. | ID | time | GC time | memory | allocations | |----------------------------------------------------|--------------:|-----------:|----------------:|------------:| | `["alpha", "klein500.pts"]` | 22.273 s (5%) | 711.869 ms | 3.62 GiB (1%) | 33591880 | | `["alpha", "torus10k.pts"]` | 6.671 s (5%) | 140.932 ms | 1.11 GiB (1%) | 10857181 | | `["cubical", "bonsai64.dipha"]` | 7.018 s (5%) | 116.517 ms | 708.58 MiB (1%) | 12168407 | | `["cubical", "lena2048.dipha"]` | 9.559 s (5%) | 525.376 ms | 2.36 GiB (1%) | 27759517 | | `["homology", "klein200.pts"]` | 2.129 s (5%) | | 47.89 MiB (1%) | 834276 | | `["homology", "lena1024.dipha"]` | 7.748 s (5%) | 278.367 ms | 763.76 MiB (1%) | 11518346 | | `["homology", "sphere100.pts"]` | 1.687 s (5%) | 12.016 ms | 90.28 MiB (1%) | 1062421 | | `["rips", "dense", "dragon2000.pts"]` | 3.079 s (5%) | 43.839 ms | 292.72 MiB (1%) | 52255 | | `["rips", "dense", "fract-r.dist"]` | 22.777 s (5%) | 356.814 ms | 1.79 GiB (1%) | 108875 | | `["rips", "dense", "o3_1024.pts"]` | 7.011 s (5%) | 58.190 ms | 478.09 MiB (1%) | 2912173 | | `["rips", "sparse", "alpha_4_sphere_2000.spdist"]` | 10.004 s (5%) | 71.688 ms | 575.70 MiB (1%) | 3751750 | | `["rips", "sparse", "dragon2000.pts"]` | 3.518 s (5%) | 10.134 ms | 322.51 MiB (1%) | 37826 | | `["rips", "sparse", "fract-r.dist"]` | 25.026 s (5%) | 340.726 ms | 1.79 GiB (1%) | 97740 | | `["rips", "sparse", "o3_1024.pts"]` | 3.230 s (5%) | 14.811 ms | 337.97 MiB (1%) | 137110 | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) CPU E5-2673 v4 @ 2.30GHz: speed user nice sys idle irq #1 2294 MHz 12722 s 0 s 1926 s 31502 s 0 s #2 2294 MHz 29144 s 0 s 2356 s 14827 s 0 s Memory: 6.791393280029297 GB (2732.8984375 MB free) Uptime: 482.0 sec Load Avg: 1.0380859375 0.97607421875 0.5537109375 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, broadwell) ``` --- # Baseline result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmark: 11 Dec 2020 - 9:36 * Package commit: a2311f * Julia commit: 788b2c * Julia command flags: None * Environment variables: None ## Results Below is a table of this job's results, obtained by running the benchmarks. The values listed in the `ID` column have the structure `[parent_group, child_group, ..., key]`, and can be used to index into the BaseBenchmarks suite to retrieve the corresponding benchmarks. The percentages accompanying time and memory values in the below table are noise tolerances. The "true" time/memory value for a given benchmark is expected to fall within this percentage of the reported value. An empty cell means that the value was zero. | ID | time | GC time | memory | allocations | |----------------------------------------------------|--------------:|-----------:|----------------:|------------:| | `["alpha", "klein500.pts"]` | 21.725 s (5%) | 719.856 ms | 3.62 GiB (1%) | 33591882 | | `["alpha", "torus10k.pts"]` | 6.428 s (5%) | 138.569 ms | 1.11 GiB (1%) | 10857180 | | `["cubical", "bonsai64.dipha"]` | 7.090 s (5%) | 119.113 ms | 708.58 MiB (1%) | 12168410 | | `["cubical", "lena2048.dipha"]` | 9.509 s (5%) | 536.587 ms | 2.36 GiB (1%) | 27759515 | | `["homology", "klein200.pts"]` | 2.016 s (5%) | | 47.90 MiB (1%) | 834277 | | `["homology", "lena1024.dipha"]` | 7.701 s (5%) | 275.734 ms | 763.76 MiB (1%) | 11518345 | | `["homology", "sphere100.pts"]` | 1.722 s (5%) | 12.792 ms | 90.28 MiB (1%) | 1062419 | | `["rips", "dense", "dragon2000.pts"]` | 3.058 s (5%) | 43.903 ms | 292.72 MiB (1%) | 52255 | | `["rips", "dense", "fract-r.dist"]` | 22.481 s (5%) | 368.497 ms | 1.79 GiB (1%) | 108875 | | `["rips", "dense", "o3_1024.pts"]` | 7.133 s (5%) | 58.270 ms | 478.09 MiB (1%) | 2912179 | | `["rips", "sparse", "alpha_4_sphere_2000.spdist"]` | 9.983 s (5%) | 75.549 ms | 575.70 MiB (1%) | 3751754 | | `["rips", "sparse", "dragon2000.pts"]` | 3.592 s (5%) | 10.748 ms | 322.51 MiB (1%) | 37826 | | `["rips", "sparse", "fract-r.dist"]` | 24.249 s (5%) | 331.751 ms | 1.79 GiB (1%) | 97740 | | `["rips", "sparse", "o3_1024.pts"]` | 3.200 s (5%) | 15.634 ms | 337.97 MiB (1%) | 137110 | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) CPU E5-2673 v4 @ 2.30GHz: speed user nice sys idle irq #1 2294 MHz 24957 s 0 s 2250 s 43235 s 0 s #2 2294 MHz 40750 s 0 s 2742 s 27126 s 0 s Memory: 6.791393280029297 GB (2709.95703125 MB free) Uptime: 725.0 sec Load Avg: 1.0 0.99951171875 0.6640625 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, broadwell) ``` --- # Runtime information | Runtime Info | | |:--|:--| | BLAS #threads | 2 | | `BLAS.vendor()` | `openblas64` | | `Sys.CPU_THREADS` | 2 | `lscpu` output: Architecture: x86_64 CPU op-mode(s): 32-bit, 64-bit Byte Order: Little Endian CPU(s): 2 On-line CPU(s) list: 0,1 Thread(s) per core: 1 Core(s) per socket: 2 Socket(s): 1 NUMA node(s): 1 Vendor ID: GenuineIntel CPU family: 6 Model: 79 Model name: Intel(R) Xeon(R) CPU E5-2673 v4 @ 2.30GHz Stepping: 1 CPU MHz: 2294.688 BogoMIPS: 4589.37 Hypervisor vendor: Microsoft Virtualization type: full L1d cache: 32K L1i cache: 32K L2 cache: 256K L3 cache: 51200K NUMA node0 CPU(s): 0,1 Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl xtopology cpuid pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch invpcid_single pti fsgsbase bmi1 hle avx2 smep bmi2 erms invpcid rtm rdseed adx smap xsaveopt md_clear | Cpu Property | Value | |:------------------ |:------------------------------------------------------- | | Brand | Intel(R) Xeon(R) CPU E5-2673 v4 @ 2.30GHz | | Vendor | :Intel | | Architecture | :Broadwell | | Model | Family: 0x06, Model: 0x4f, Stepping: 0x01, Type: 0x00 | | Cores | 2 physical cores, 2 logical cores (on executing CPU) | | | No Hyperthreading detected | | Clock Frequencies | Not supported by CPU | | Data Cache | Level 1:3 : (32, 256, 51200) kbytes | | | 64 byte cache line size | | Address Size | 48 bits virtual, 46 bits physical | | SIMD | 256 bit = 32 byte max. SIMD vector size | | Time Stamp Counter | TSC is accessible via `rdtsc` | | | TSC increased at every clock cycle (non-invariant TSC) | | Perf. Monitoring | Performance Monitoring Counters (PMC) are not supported | | Hypervisor | Yes, Microsoft |
github-actions[bot] commented 3 years ago
Benchmark result # Judge result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmarks: - Target: 11 Dec 2020 - 09:50 - Baseline: 11 Dec 2020 - 09:54 * Package commits: - Target: 200c60 - Baseline: a2311f * Julia commits: - Target: 788b2c - Baseline: 788b2c * Julia command flags: - Target: None - Baseline: None * Environment variables: - Target: None - Baseline: None ## Results A ratio greater than `1.0` denotes a possible regression (marked with :x:), while a ratio less than `1.0` denotes a possible improvement (marked with :white_check_mark:). Only significant results - results that indicate possible regressions or improvements - are shown below (thus, an empty table means that all benchmark results remained invariant between builds). | ID | time ratio | memory ratio | |----------------------------------------------------|------------------------------|--------------| | `["cubical", "bonsai64.dipha"]` | 1.08 (5%) :x: | 1.00 (1%) | | `["rips", "sparse", "dragon2000.pts"]` | 0.93 (5%) :white_check_mark: | 1.00 (1%) | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ### Target ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) CPU E5-2673 v4 @ 2.30GHz: speed user nice sys idle irq #1 2294 MHz 31596 s 0 s 2264 s 39074 s 0 s #2 2294 MHz 8167 s 0 s 1964 s 62610 s 0 s Memory: 6.791393280029297 GB (2732.96875 MB free) Uptime: 744.0 sec Load Avg: 1.05126953125 0.78466796875 0.43359375 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, broadwell) ``` ### Baseline ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) CPU E5-2673 v4 @ 2.30GHz: speed user nice sys idle irq #1 2294 MHz 49294 s 0 s 2743 s 43917 s 0 s #2 2294 MHz 13042 s 0 s 2143 s 80540 s 0 s Memory: 6.791393280029297 GB (2705.19921875 MB free) Uptime: 975.0 sec Load Avg: 1.0 0.908203125 0.56787109375 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, broadwell) ``` --- # Target result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmark: 11 Dec 2020 - 9:50 * Package commit: 200c60 * Julia commit: 788b2c * Julia command flags: None * Environment variables: None ## Results Below is a table of this job's results, obtained by running the benchmarks. The values listed in the `ID` column have the structure `[parent_group, child_group, ..., key]`, and can be used to index into the BaseBenchmarks suite to retrieve the corresponding benchmarks. The percentages accompanying time and memory values in the below table are noise tolerances. The "true" time/memory value for a given benchmark is expected to fall within this percentage of the reported value. An empty cell means that the value was zero. | ID | time | GC time | memory | allocations | |----------------------------------------------------|--------------:|-----------:|----------------:|------------:| | `["alpha", "klein500.pts"]` | 20.509 s (5%) | 673.769 ms | 3.62 GiB (1%) | 33591882 | | `["alpha", "torus10k.pts"]` | 6.120 s (5%) | 143.647 ms | 1.11 GiB (1%) | 10857180 | | `["cubical", "bonsai64.dipha"]` | 6.945 s (5%) | 117.764 ms | 708.59 MiB (1%) | 12168410 | | `["cubical", "lena2048.dipha"]` | 8.861 s (5%) | 507.032 ms | 2.36 GiB (1%) | 27759515 | | `["homology", "klein200.pts"]` | 1.798 s (5%) | | 47.89 MiB (1%) | 834276 | | `["homology", "lena1024.dipha"]` | 7.024 s (5%) | 264.177 ms | 763.77 MiB (1%) | 11518349 | | `["homology", "sphere100.pts"]` | 1.604 s (5%) | 11.272 ms | 90.28 MiB (1%) | 1062420 | | `["rips", "dense", "dragon2000.pts"]` | 2.975 s (5%) | 42.596 ms | 292.72 MiB (1%) | 52255 | | `["rips", "dense", "fract-r.dist"]` | 21.693 s (5%) | 325.642 ms | 1.79 GiB (1%) | 108875 | | `["rips", "dense", "o3_1024.pts"]` | 6.488 s (5%) | 50.242 ms | 478.08 MiB (1%) | 2912194 | | `["rips", "sparse", "alpha_4_sphere_2000.spdist"]` | 9.387 s (5%) | 70.636 ms | 575.70 MiB (1%) | 3751758 | | `["rips", "sparse", "dragon2000.pts"]` | 3.312 s (5%) | 10.525 ms | 322.51 MiB (1%) | 37826 | | `["rips", "sparse", "fract-r.dist"]` | 24.076 s (5%) | 337.076 ms | 1.79 GiB (1%) | 97740 | | `["rips", "sparse", "o3_1024.pts"]` | 3.038 s (5%) | 14.017 ms | 337.97 MiB (1%) | 137110 | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) CPU E5-2673 v4 @ 2.30GHz: speed user nice sys idle irq #1 2294 MHz 31596 s 0 s 2264 s 39074 s 0 s #2 2294 MHz 8167 s 0 s 1964 s 62610 s 0 s Memory: 6.791393280029297 GB (2732.96875 MB free) Uptime: 744.0 sec Load Avg: 1.05126953125 0.78466796875 0.43359375 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, broadwell) ``` --- # Baseline result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmark: 11 Dec 2020 - 9:54 * Package commit: a2311f * Julia commit: 788b2c * Julia command flags: None * Environment variables: None ## Results Below is a table of this job's results, obtained by running the benchmarks. The values listed in the `ID` column have the structure `[parent_group, child_group, ..., key]`, and can be used to index into the BaseBenchmarks suite to retrieve the corresponding benchmarks. The percentages accompanying time and memory values in the below table are noise tolerances. The "true" time/memory value for a given benchmark is expected to fall within this percentage of the reported value. An empty cell means that the value was zero. | ID | time | GC time | memory | allocations | |----------------------------------------------------|--------------:|-----------:|----------------:|------------:| | `["alpha", "klein500.pts"]` | 20.935 s (5%) | 683.971 ms | 3.62 GiB (1%) | 33591881 | | `["alpha", "torus10k.pts"]` | 6.012 s (5%) | 136.538 ms | 1.11 GiB (1%) | 10857180 | | `["cubical", "bonsai64.dipha"]` | 6.402 s (5%) | 110.678 ms | 708.58 MiB (1%) | 12168409 | | `["cubical", "lena2048.dipha"]` | 9.326 s (5%) | 535.907 ms | 2.36 GiB (1%) | 27759517 | | `["homology", "klein200.pts"]` | 1.800 s (5%) | | 47.89 MiB (1%) | 834276 | | `["homology", "lena1024.dipha"]` | 7.141 s (5%) | 265.321 ms | 763.77 MiB (1%) | 11518347 | | `["homology", "sphere100.pts"]` | 1.544 s (5%) | 12.137 ms | 90.28 MiB (1%) | 1062421 | | `["rips", "dense", "dragon2000.pts"]` | 3.007 s (5%) | 44.994 ms | 292.72 MiB (1%) | 52255 | | `["rips", "dense", "fract-r.dist"]` | 21.352 s (5%) | 332.631 ms | 1.79 GiB (1%) | 108875 | | `["rips", "dense", "o3_1024.pts"]` | 6.632 s (5%) | 50.605 ms | 478.09 MiB (1%) | 2912191 | | `["rips", "sparse", "alpha_4_sphere_2000.spdist"]` | 9.520 s (5%) | 70.493 ms | 575.69 MiB (1%) | 3751758 | | `["rips", "sparse", "dragon2000.pts"]` | 3.560 s (5%) | 10.807 ms | 322.51 MiB (1%) | 37826 | | `["rips", "sparse", "fract-r.dist"]` | 24.052 s (5%) | 338.635 ms | 1.79 GiB (1%) | 97740 | | `["rips", "sparse", "o3_1024.pts"]` | 3.048 s (5%) | 15.944 ms | 337.97 MiB (1%) | 137110 | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) CPU E5-2673 v4 @ 2.30GHz: speed user nice sys idle irq #1 2294 MHz 49294 s 0 s 2743 s 43917 s 0 s #2 2294 MHz 13042 s 0 s 2143 s 80540 s 0 s Memory: 6.791393280029297 GB (2705.19921875 MB free) Uptime: 975.0 sec Load Avg: 1.0 0.908203125 0.56787109375 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, broadwell) ``` --- # Runtime information | Runtime Info | | |:--|:--| | BLAS #threads | 2 | | `BLAS.vendor()` | `openblas64` | | `Sys.CPU_THREADS` | 2 | `lscpu` output: Architecture: x86_64 CPU op-mode(s): 32-bit, 64-bit Byte Order: Little Endian CPU(s): 2 On-line CPU(s) list: 0,1 Thread(s) per core: 1 Core(s) per socket: 2 Socket(s): 1 NUMA node(s): 1 Vendor ID: GenuineIntel CPU family: 6 Model: 79 Model name: Intel(R) Xeon(R) CPU E5-2673 v4 @ 2.30GHz Stepping: 1 CPU MHz: 2294.683 BogoMIPS: 4589.36 Hypervisor vendor: Microsoft Virtualization type: full L1d cache: 32K L1i cache: 32K L2 cache: 256K L3 cache: 51200K NUMA node0 CPU(s): 0,1 Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl xtopology cpuid pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch invpcid_single pti fsgsbase bmi1 hle avx2 smep bmi2 erms invpcid rtm rdseed adx smap xsaveopt md_clear | Cpu Property | Value | |:------------------ |:------------------------------------------------------- | | Brand | Intel(R) Xeon(R) CPU E5-2673 v4 @ 2.30GHz | | Vendor | :Intel | | Architecture | :Broadwell | | Model | Family: 0x06, Model: 0x4f, Stepping: 0x01, Type: 0x00 | | Cores | 2 physical cores, 2 logical cores (on executing CPU) | | | No Hyperthreading detected | | Clock Frequencies | Not supported by CPU | | Data Cache | Level 1:3 : (32, 256, 51200) kbytes | | | 64 byte cache line size | | Address Size | 48 bits virtual, 46 bits physical | | SIMD | 256 bit = 32 byte max. SIMD vector size | | Time Stamp Counter | TSC is accessible via `rdtsc` | | | TSC increased at every clock cycle (non-invariant TSC) | | Perf. Monitoring | Performance Monitoring Counters (PMC) are not supported | | Hypervisor | Yes, Microsoft |
coveralls commented 3 years ago

Pull Request Test Coverage Report for Build 426791437

Totals Coverage Status
Change from base Build 412301427: 0.07%
Covered Lines: 1362
Relevant Lines: 1424
💛 - Coveralls
github-actions[bot] commented 3 years ago
Benchmark result # Judge result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmarks: - Target: 11 Dec 2020 - 11:37 - Baseline: 11 Dec 2020 - 11:41 * Package commits: - Target: e8bf11 - Baseline: a2311f * Julia commits: - Target: 788b2c - Baseline: 788b2c * Julia command flags: - Target: None - Baseline: None * Environment variables: - Target: None - Baseline: None ## Results A ratio greater than `1.0` denotes a possible regression (marked with :x:), while a ratio less than `1.0` denotes a possible improvement (marked with :white_check_mark:). Only significant results - results that indicate possible regressions or improvements - are shown below (thus, an empty table means that all benchmark results remained invariant between builds). | ID | time ratio | memory ratio | |----------------------------------------------------|------------|--------------| ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ### Target ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 25618 s 0 s 2271 s 20382 s 0 s #2 2095 MHz 10438 s 0 s 1947 s 35765 s 0 s Memory: 6.791393280029297 GB (2752.64453125 MB free) Uptime: 499.0 sec Load Avg: 1.0908203125 0.91845703125 0.49755859375 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` ### Baseline ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 31361 s 0 s 2584 s 35340 s 0 s #2 2095 MHz 25541 s 0 s 2514 s 41150 s 0 s Memory: 6.791393280029297 GB (2770.6953125 MB free) Uptime: 710.0 sec Load Avg: 1.01708984375 0.9873046875 0.6181640625 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Target result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmark: 11 Dec 2020 - 11:37 * Package commit: e8bf11 * Julia commit: 788b2c * Julia command flags: None * Environment variables: None ## Results Below is a table of this job's results, obtained by running the benchmarks. The values listed in the `ID` column have the structure `[parent_group, child_group, ..., key]`, and can be used to index into the BaseBenchmarks suite to retrieve the corresponding benchmarks. The percentages accompanying time and memory values in the below table are noise tolerances. The "true" time/memory value for a given benchmark is expected to fall within this percentage of the reported value. An empty cell means that the value was zero. | ID | time | GC time | memory | allocations | |----------------------------------------------------|--------------:|-----------:|----------------:|------------:| | `["alpha", "klein500.pts"]` | 19.298 s (5%) | 700.905 ms | 3.62 GiB (1%) | 33591884 | | `["alpha", "torus10k.pts"]` | 5.592 s (5%) | 108.810 ms | 1.11 GiB (1%) | 10857181 | | `["cubical", "bonsai64.dipha"]` | 6.128 s (5%) | 96.041 ms | 708.59 MiB (1%) | 12168407 | | `["cubical", "lena2048.dipha"]` | 8.725 s (5%) | 474.898 ms | 2.36 GiB (1%) | 27759519 | | `["homology", "klein200.pts"]` | 1.657 s (5%) | | 47.89 MiB (1%) | 834276 | | `["homology", "lena1024.dipha"]` | 6.646 s (5%) | 235.725 ms | 763.76 MiB (1%) | 11518344 | | `["homology", "sphere100.pts"]` | 1.378 s (5%) | 10.016 ms | 90.28 MiB (1%) | 1062423 | | `["rips", "dense", "dragon2000.pts"]` | 2.817 s (5%) | 36.598 ms | 292.72 MiB (1%) | 52255 | | `["rips", "dense", "fract-r.dist"]` | 20.070 s (5%) | 303.651 ms | 1.79 GiB (1%) | 108875 | | `["rips", "dense", "o3_1024.pts"]` | 6.060 s (5%) | 49.626 ms | 478.08 MiB (1%) | 2912188 | | `["rips", "sparse", "alpha_4_sphere_2000.spdist"]` | 9.060 s (5%) | 61.644 ms | 575.70 MiB (1%) | 3751754 | | `["rips", "sparse", "dragon2000.pts"]` | 3.098 s (5%) | 8.325 ms | 322.51 MiB (1%) | 37826 | | `["rips", "sparse", "fract-r.dist"]` | 22.231 s (5%) | 299.895 ms | 1.79 GiB (1%) | 97740 | | `["rips", "sparse", "o3_1024.pts"]` | 2.947 s (5%) | 12.866 ms | 337.97 MiB (1%) | 137110 | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 25618 s 0 s 2271 s 20382 s 0 s #2 2095 MHz 10438 s 0 s 1947 s 35765 s 0 s Memory: 6.791393280029297 GB (2752.64453125 MB free) Uptime: 499.0 sec Load Avg: 1.0908203125 0.91845703125 0.49755859375 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Baseline result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmark: 11 Dec 2020 - 11:41 * Package commit: a2311f * Julia commit: 788b2c * Julia command flags: None * Environment variables: None ## Results Below is a table of this job's results, obtained by running the benchmarks. The values listed in the `ID` column have the structure `[parent_group, child_group, ..., key]`, and can be used to index into the BaseBenchmarks suite to retrieve the corresponding benchmarks. The percentages accompanying time and memory values in the below table are noise tolerances. The "true" time/memory value for a given benchmark is expected to fall within this percentage of the reported value. An empty cell means that the value was zero. | ID | time | GC time | memory | allocations | |----------------------------------------------------|--------------:|-----------:|----------------:|------------:| | `["alpha", "klein500.pts"]` | 19.688 s (5%) | 714.340 ms | 3.62 GiB (1%) | 33591884 | | `["alpha", "torus10k.pts"]` | 5.585 s (5%) | 111.639 ms | 1.11 GiB (1%) | 10857180 | | `["cubical", "bonsai64.dipha"]` | 6.103 s (5%) | 96.591 ms | 708.60 MiB (1%) | 12168408 | | `["cubical", "lena2048.dipha"]` | 8.629 s (5%) | 475.782 ms | 2.36 GiB (1%) | 27759514 | | `["homology", "klein200.pts"]` | 1.641 s (5%) | | 47.89 MiB (1%) | 834276 | | `["homology", "lena1024.dipha"]` | 6.662 s (5%) | 238.321 ms | 763.76 MiB (1%) | 11518345 | | `["homology", "sphere100.pts"]` | 1.403 s (5%) | 10.696 ms | 90.28 MiB (1%) | 1062421 | | `["rips", "dense", "dragon2000.pts"]` | 2.828 s (5%) | 35.728 ms | 292.72 MiB (1%) | 52255 | | `["rips", "dense", "fract-r.dist"]` | 20.179 s (5%) | 304.721 ms | 1.79 GiB (1%) | 108875 | | `["rips", "dense", "o3_1024.pts"]` | 6.234 s (5%) | 49.710 ms | 478.09 MiB (1%) | 2912190 | | `["rips", "sparse", "alpha_4_sphere_2000.spdist"]` | 9.087 s (5%) | 61.015 ms | 575.70 MiB (1%) | 3751754 | | `["rips", "sparse", "dragon2000.pts"]` | 3.074 s (5%) | 8.261 ms | 322.51 MiB (1%) | 37826 | | `["rips", "sparse", "fract-r.dist"]` | 22.204 s (5%) | 300.588 ms | 1.79 GiB (1%) | 97740 | | `["rips", "sparse", "o3_1024.pts"]` | 2.897 s (5%) | 12.644 ms | 337.97 MiB (1%) | 137110 | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 31361 s 0 s 2584 s 35340 s 0 s #2 2095 MHz 25541 s 0 s 2514 s 41150 s 0 s Memory: 6.791393280029297 GB (2770.6953125 MB free) Uptime: 710.0 sec Load Avg: 1.01708984375 0.9873046875 0.6181640625 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Runtime information | Runtime Info | | |:--|:--| | BLAS #threads | 2 | | `BLAS.vendor()` | `openblas64` | | `Sys.CPU_THREADS` | 2 | `lscpu` output: Architecture: x86_64 CPU op-mode(s): 32-bit, 64-bit Byte Order: Little Endian CPU(s): 2 On-line CPU(s) list: 0,1 Thread(s) per core: 1 Core(s) per socket: 2 Socket(s): 1 NUMA node(s): 1 Vendor ID: GenuineIntel CPU family: 6 Model: 85 Model name: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz Stepping: 4 CPU MHz: 2095.196 BogoMIPS: 4190.39 Hypervisor vendor: Microsoft Virtualization type: full L1d cache: 32K L1i cache: 32K L2 cache: 1024K L3 cache: 36608K NUMA node0 CPU(s): 0,1 Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl xtopology cpuid pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch invpcid_single pti fsgsbase bmi1 hle avx2 smep bmi2 erms invpcid rtm mpx avx512f avx512dq rdseed adx smap clflushopt avx512cd avx512bw avx512vl xsaveopt xsavec xsaves md_clear | Cpu Property | Value | |:------------------ |:------------------------------------------------------- | | Brand | Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz | | Vendor | :Intel | | Architecture | :Skylake | | Model | Family: 0x06, Model: 0x55, Stepping: 0x04, Type: 0x00 | | Cores | 2 physical cores, 2 logical cores (on executing CPU) | | | No Hyperthreading detected | | Clock Frequencies | Not supported by CPU | | Data Cache | Level 1:3 : (32, 1024, 36608) kbytes | | | 64 byte cache line size | | Address Size | 48 bits virtual, 46 bits physical | | SIMD | 512 bit = 64 byte max. SIMD vector size | | Time Stamp Counter | TSC is accessible via `rdtsc` | | | TSC increased at every clock cycle (non-invariant TSC) | | Perf. Monitoring | Performance Monitoring Counters (PMC) are not supported | | Hypervisor | Yes, Microsoft |
github-actions[bot] commented 3 years ago
Benchmark result # Judge result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmarks: - Target: 14 Dec 2020 - 07:19 - Baseline: 14 Dec 2020 - 07:23 * Package commits: - Target: 8cbb22 - Baseline: a2311f * Julia commits: - Target: 788b2c - Baseline: 788b2c * Julia command flags: - Target: None - Baseline: None * Environment variables: - Target: None - Baseline: None ## Results A ratio greater than `1.0` denotes a possible regression (marked with :x:), while a ratio less than `1.0` denotes a possible improvement (marked with :white_check_mark:). Only significant results - results that indicate possible regressions or improvements - are shown below (thus, an empty table means that all benchmark results remained invariant between builds). | ID | time ratio | memory ratio | |----------------------------------------------------|------------|--------------| ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ### Target ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 23444 s 0 s 2214 s 13860 s 0 s #2 2095 MHz 11922 s 0 s 2100 s 25085 s 0 s Memory: 6.791393280029297 GB (2764.9765625 MB free) Uptime: 410.0 sec Load Avg: 1.04638671875 0.93310546875 0.49462890625 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` ### Baseline ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 41956 s 0 s 2780 s 15345 s 0 s #2 2095 MHz 13690 s 0 s 2403 s 43520 s 0 s Memory: 6.791393280029297 GB (2779.5703125 MB free) Uptime: 615.0 sec Load Avg: 1.078125 1.00634765625 0.61962890625 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Target result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmark: 14 Dec 2020 - 7:19 * Package commit: 8cbb22 * Julia commit: 788b2c * Julia command flags: None * Environment variables: None ## Results Below is a table of this job's results, obtained by running the benchmarks. The values listed in the `ID` column have the structure `[parent_group, child_group, ..., key]`, and can be used to index into the BaseBenchmarks suite to retrieve the corresponding benchmarks. The percentages accompanying time and memory values in the below table are noise tolerances. The "true" time/memory value for a given benchmark is expected to fall within this percentage of the reported value. An empty cell means that the value was zero. | ID | time | GC time | memory | allocations | |----------------------------------------------------|--------------:|-----------:|----------------:|------------:| | `["alpha", "klein500.pts"]` | 19.053 s (5%) | 672.045 ms | 3.62 GiB (1%) | 33593435 | | `["alpha", "torus10k.pts"]` | 5.495 s (5%) | 106.426 ms | 1.11 GiB (1%) | 10857306 | | `["cubical", "bonsai64.dipha"]` | 6.144 s (5%) | 231.666 ms | 732.10 MiB (1%) | 12169892 | | `["cubical", "lena2048.dipha"]` | 8.453 s (5%) | 469.015 ms | 2.36 GiB (1%) | 27759518 | | `["homology", "klein200.pts"]` | 1.576 s (5%) | | 47.90 MiB (1%) | 834463 | | `["homology", "lena1024.dipha"]` | 6.400 s (5%) | 234.205 ms | 763.85 MiB (1%) | 11520026 | | `["homology", "sphere100.pts"]` | 1.379 s (5%) | 10.173 ms | 90.36 MiB (1%) | 1063919 | | `["rips", "dense", "dragon2000.pts"]` | 2.797 s (5%) | 34.747 ms | 292.72 MiB (1%) | 52255 | | `["rips", "dense", "fract-r.dist"]` | 19.693 s (5%) | 302.380 ms | 1.79 GiB (1%) | 108875 | | `["rips", "dense", "o3_1024.pts"]` | 6.254 s (5%) | 65.250 ms | 477.58 MiB (1%) | 2903844 | | `["rips", "sparse", "alpha_4_sphere_2000.spdist"]` | 9.091 s (5%) | 58.574 ms | 575.78 MiB (1%) | 3753357 | | `["rips", "sparse", "dragon2000.pts"]` | 3.037 s (5%) | 8.154 ms | 322.51 MiB (1%) | 37826 | | `["rips", "sparse", "fract-r.dist"]` | 21.904 s (5%) | 289.105 ms | 1.79 GiB (1%) | 97740 | | `["rips", "sparse", "o3_1024.pts"]` | 2.948 s (5%) | 12.270 ms | 337.97 MiB (1%) | 137110 | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 23444 s 0 s 2214 s 13860 s 0 s #2 2095 MHz 11922 s 0 s 2100 s 25085 s 0 s Memory: 6.791393280029297 GB (2764.9765625 MB free) Uptime: 410.0 sec Load Avg: 1.04638671875 0.93310546875 0.49462890625 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Baseline result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmark: 14 Dec 2020 - 7:23 * Package commit: a2311f * Julia commit: 788b2c * Julia command flags: None * Environment variables: None ## Results Below is a table of this job's results, obtained by running the benchmarks. The values listed in the `ID` column have the structure `[parent_group, child_group, ..., key]`, and can be used to index into the BaseBenchmarks suite to retrieve the corresponding benchmarks. The percentages accompanying time and memory values in the below table are noise tolerances. The "true" time/memory value for a given benchmark is expected to fall within this percentage of the reported value. An empty cell means that the value was zero. | ID | time | GC time | memory | allocations | |----------------------------------------------------|--------------:|-----------:|----------------:|------------:| | `["alpha", "klein500.pts"]` | 18.730 s (5%) | 690.121 ms | 3.62 GiB (1%) | 33593434 | | `["alpha", "torus10k.pts"]` | 5.298 s (5%) | 107.743 ms | 1.11 GiB (1%) | 10857308 | | `["cubical", "bonsai64.dipha"]` | 6.237 s (5%) | 227.016 ms | 732.10 MiB (1%) | 12169891 | | `["cubical", "lena2048.dipha"]` | 8.323 s (5%) | 467.657 ms | 2.36 GiB (1%) | 27759518 | | `["homology", "klein200.pts"]` | 1.610 s (5%) | | 47.90 MiB (1%) | 834463 | | `["homology", "lena1024.dipha"]` | 6.434 s (5%) | 236.821 ms | 763.85 MiB (1%) | 11520030 | | `["homology", "sphere100.pts"]` | 1.363 s (5%) | 10.194 ms | 90.36 MiB (1%) | 1063916 | | `["rips", "dense", "dragon2000.pts"]` | 2.791 s (5%) | 33.204 ms | 292.72 MiB (1%) | 52255 | | `["rips", "dense", "fract-r.dist"]` | 19.820 s (5%) | 293.082 ms | 1.79 GiB (1%) | 108875 | | `["rips", "dense", "o3_1024.pts"]` | 6.018 s (5%) | 64.195 ms | 477.57 MiB (1%) | 2903842 | | `["rips", "sparse", "alpha_4_sphere_2000.spdist"]` | 8.878 s (5%) | 50.602 ms | 575.78 MiB (1%) | 3753360 | | `["rips", "sparse", "dragon2000.pts"]` | 3.045 s (5%) | 7.987 ms | 322.51 MiB (1%) | 37826 | | `["rips", "sparse", "fract-r.dist"]` | 21.889 s (5%) | 287.377 ms | 1.79 GiB (1%) | 97740 | | `["rips", "sparse", "o3_1024.pts"]` | 2.868 s (5%) | 12.194 ms | 337.97 MiB (1%) | 137110 | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 41956 s 0 s 2780 s 15345 s 0 s #2 2095 MHz 13690 s 0 s 2403 s 43520 s 0 s Memory: 6.791393280029297 GB (2779.5703125 MB free) Uptime: 615.0 sec Load Avg: 1.078125 1.00634765625 0.61962890625 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Runtime information | Runtime Info | | |:--|:--| | BLAS #threads | 2 | | `BLAS.vendor()` | `openblas64` | | `Sys.CPU_THREADS` | 2 | `lscpu` output: Architecture: x86_64 CPU op-mode(s): 32-bit, 64-bit Byte Order: Little Endian CPU(s): 2 On-line CPU(s) list: 0,1 Thread(s) per core: 1 Core(s) per socket: 2 Socket(s): 1 NUMA node(s): 1 Vendor ID: GenuineIntel CPU family: 6 Model: 85 Model name: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz Stepping: 4 CPU MHz: 2095.199 BogoMIPS: 4190.39 Hypervisor vendor: Microsoft Virtualization type: full L1d cache: 32K L1i cache: 32K L2 cache: 1024K L3 cache: 36608K NUMA node0 CPU(s): 0,1 Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl xtopology cpuid pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch invpcid_single pti fsgsbase bmi1 hle avx2 smep bmi2 erms invpcid rtm mpx avx512f avx512dq rdseed adx smap clflushopt avx512cd avx512bw avx512vl xsaveopt xsavec xsaves md_clear | Cpu Property | Value | |:------------------ |:------------------------------------------------------- | | Brand | Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz | | Vendor | :Intel | | Architecture | :Skylake | | Model | Family: 0x06, Model: 0x55, Stepping: 0x04, Type: 0x00 | | Cores | 2 physical cores, 2 logical cores (on executing CPU) | | | No Hyperthreading detected | | Clock Frequencies | Not supported by CPU | | Data Cache | Level 1:3 : (32, 1024, 36608) kbytes | | | 64 byte cache line size | | Address Size | 48 bits virtual, 46 bits physical | | SIMD | 512 bit = 64 byte max. SIMD vector size | | Time Stamp Counter | TSC is accessible via `rdtsc` | | | TSC increased at every clock cycle (non-invariant TSC) | | Perf. Monitoring | Performance Monitoring Counters (PMC) are not supported | | Hypervisor | Yes, Microsoft |
github-actions[bot] commented 3 years ago
Benchmark result # Judge result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmarks: - Target: 14 Dec 2020 - 12:04 - Baseline: 14 Dec 2020 - 12:08 * Package commits: - Target: c3a19b - Baseline: a2311f * Julia commits: - Target: 788b2c - Baseline: 788b2c * Julia command flags: - Target: None - Baseline: None * Environment variables: - Target: None - Baseline: None ## Results A ratio greater than `1.0` denotes a possible regression (marked with :x:), while a ratio less than `1.0` denotes a possible improvement (marked with :white_check_mark:). Only significant results - results that indicate possible regressions or improvements - are shown below (thus, an empty table means that all benchmark results remained invariant between builds). | ID | time ratio | memory ratio | |----------------------------------------------------|------------|--------------| ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ### Target ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 7557 s 0 s 1960 s 27888 s 0 s #2 2095 MHz 25703 s 0 s 2099 s 9661 s 0 s Memory: 6.791393280029297 GB (2803.7578125 MB free) Uptime: 393.0 sec Load Avg: 1.01513671875 0.8564453125 0.43408203125 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` ### Baseline ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 19570 s 0 s 2337 s 35106 s 0 s #2 2095 MHz 33064 s 0 s 2556 s 21436 s 0 s Memory: 6.791393280029297 GB (2662.27734375 MB free) Uptime: 589.0 sec Load Avg: 1.0078125 0.943359375 0.55517578125 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Target result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmark: 14 Dec 2020 - 12:4 * Package commit: c3a19b * Julia commit: 788b2c * Julia command flags: None * Environment variables: None ## Results Below is a table of this job's results, obtained by running the benchmarks. The values listed in the `ID` column have the structure `[parent_group, child_group, ..., key]`, and can be used to index into the BaseBenchmarks suite to retrieve the corresponding benchmarks. The percentages accompanying time and memory values in the below table are noise tolerances. The "true" time/memory value for a given benchmark is expected to fall within this percentage of the reported value. An empty cell means that the value was zero. | ID | time | GC time | memory | allocations | |----------------------------------------------------|--------------:|-----------:|----------------:|------------:| | `["alpha", "klein500.pts"]` | 17.916 s (5%) | 654.091 ms | 3.62 GiB (1%) | 33593443 | | `["alpha", "torus10k.pts"]` | 5.104 s (5%) | 105.897 ms | 1.11 GiB (1%) | 10857304 | | `["cubical", "bonsai64.dipha"]` | 5.864 s (5%) | 222.435 ms | 732.11 MiB (1%) | 12169893 | | `["cubical", "lena2048.dipha"]` | 7.837 s (5%) | 450.420 ms | 2.36 GiB (1%) | 27759520 | | `["homology", "klein200.pts"]` | 1.500 s (5%) | | 47.89 MiB (1%) | 834461 | | `["homology", "lena1024.dipha"]` | 6.165 s (5%) | 220.776 ms | 763.85 MiB (1%) | 11520029 | | `["homology", "sphere100.pts"]` | 1.275 s (5%) | 9.643 ms | 90.35 MiB (1%) | 1063914 | | `["rips", "dense", "dragon2000.pts"]` | 2.656 s (5%) | 32.338 ms | 292.72 MiB (1%) | 52255 | | `["rips", "dense", "fract-r.dist"]` | 18.767 s (5%) | 276.817 ms | 1.79 GiB (1%) | 108875 | | `["rips", "dense", "o3_1024.pts"]` | 5.679 s (5%) | 62.737 ms | 477.58 MiB (1%) | 2903870 | | `["rips", "sparse", "alpha_4_sphere_2000.spdist"]` | 8.456 s (5%) | 56.995 ms | 575.80 MiB (1%) | 3753357 | | `["rips", "sparse", "dragon2000.pts"]` | 2.963 s (5%) | 8.066 ms | 322.51 MiB (1%) | 37826 | | `["rips", "sparse", "fract-r.dist"]` | 21.166 s (5%) | 282.225 ms | 1.79 GiB (1%) | 97740 | | `["rips", "sparse", "o3_1024.pts"]` | 2.762 s (5%) | 12.249 ms | 337.97 MiB (1%) | 137110 | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 7557 s 0 s 1960 s 27888 s 0 s #2 2095 MHz 25703 s 0 s 2099 s 9661 s 0 s Memory: 6.791393280029297 GB (2803.7578125 MB free) Uptime: 393.0 sec Load Avg: 1.01513671875 0.8564453125 0.43408203125 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Baseline result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmark: 14 Dec 2020 - 12:8 * Package commit: a2311f * Julia commit: 788b2c * Julia command flags: None * Environment variables: None ## Results Below is a table of this job's results, obtained by running the benchmarks. The values listed in the `ID` column have the structure `[parent_group, child_group, ..., key]`, and can be used to index into the BaseBenchmarks suite to retrieve the corresponding benchmarks. The percentages accompanying time and memory values in the below table are noise tolerances. The "true" time/memory value for a given benchmark is expected to fall within this percentage of the reported value. An empty cell means that the value was zero. | ID | time | GC time | memory | allocations | |----------------------------------------------------|--------------:|-----------:|----------------:|------------:| | `["alpha", "klein500.pts"]` | 18.211 s (5%) | 691.992 ms | 3.62 GiB (1%) | 33593441 | | `["alpha", "torus10k.pts"]` | 5.184 s (5%) | 104.722 ms | 1.11 GiB (1%) | 10857305 | | `["cubical", "bonsai64.dipha"]` | 5.867 s (5%) | 222.866 ms | 732.10 MiB (1%) | 12169898 | | `["cubical", "lena2048.dipha"]` | 8.183 s (5%) | 449.173 ms | 2.36 GiB (1%) | 27759521 | | `["homology", "klein200.pts"]` | 1.503 s (5%) | | 47.89 MiB (1%) | 834461 | | `["homology", "lena1024.dipha"]` | 6.165 s (5%) | 223.514 ms | 763.85 MiB (1%) | 11520028 | | `["homology", "sphere100.pts"]` | 1.305 s (5%) | 9.700 ms | 90.35 MiB (1%) | 1063916 | | `["rips", "dense", "dragon2000.pts"]` | 2.593 s (5%) | 33.470 ms | 292.72 MiB (1%) | 52255 | | `["rips", "dense", "fract-r.dist"]` | 18.964 s (5%) | 276.167 ms | 1.79 GiB (1%) | 108875 | | `["rips", "dense", "o3_1024.pts"]` | 5.741 s (5%) | 63.642 ms | 477.58 MiB (1%) | 2903867 | | `["rips", "sparse", "alpha_4_sphere_2000.spdist"]` | 8.408 s (5%) | 48.842 ms | 575.78 MiB (1%) | 3753358 | | `["rips", "sparse", "dragon2000.pts"]` | 2.951 s (5%) | 8.125 ms | 322.51 MiB (1%) | 37826 | | `["rips", "sparse", "fract-r.dist"]` | 21.069 s (5%) | 276.908 ms | 1.79 GiB (1%) | 97740 | | `["rips", "sparse", "o3_1024.pts"]` | 2.653 s (5%) | 11.942 ms | 337.97 MiB (1%) | 137110 | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 19570 s 0 s 2337 s 35106 s 0 s #2 2095 MHz 33064 s 0 s 2556 s 21436 s 0 s Memory: 6.791393280029297 GB (2662.27734375 MB free) Uptime: 589.0 sec Load Avg: 1.0078125 0.943359375 0.55517578125 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Runtime information | Runtime Info | | |:--|:--| | BLAS #threads | 2 | | `BLAS.vendor()` | `openblas64` | | `Sys.CPU_THREADS` | 2 | `lscpu` output: Architecture: x86_64 CPU op-mode(s): 32-bit, 64-bit Byte Order: Little Endian CPU(s): 2 On-line CPU(s) list: 0,1 Thread(s) per core: 1 Core(s) per socket: 2 Socket(s): 1 NUMA node(s): 1 Vendor ID: GenuineIntel CPU family: 6 Model: 85 Model name: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz Stepping: 4 CPU MHz: 2095.078 BogoMIPS: 4190.15 Hypervisor vendor: Microsoft Virtualization type: full L1d cache: 32K L1i cache: 32K L2 cache: 1024K L3 cache: 36608K NUMA node0 CPU(s): 0,1 Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl xtopology cpuid pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch invpcid_single pti fsgsbase bmi1 hle avx2 smep bmi2 erms invpcid rtm mpx avx512f avx512dq rdseed adx smap clflushopt avx512cd avx512bw avx512vl xsaveopt xsavec xsaves md_clear | Cpu Property | Value | |:------------------ |:------------------------------------------------------- | | Brand | Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz | | Vendor | :Intel | | Architecture | :Skylake | | Model | Family: 0x06, Model: 0x55, Stepping: 0x04, Type: 0x00 | | Cores | 2 physical cores, 2 logical cores (on executing CPU) | | | No Hyperthreading detected | | Clock Frequencies | Not supported by CPU | | Data Cache | Level 1:3 : (32, 1024, 36608) kbytes | | | 64 byte cache line size | | Address Size | 48 bits virtual, 46 bits physical | | SIMD | 512 bit = 64 byte max. SIMD vector size | | Time Stamp Counter | TSC is accessible via `rdtsc` | | | TSC increased at every clock cycle (non-invariant TSC) | | Perf. Monitoring | Performance Monitoring Counters (PMC) are not supported | | Hypervisor | Yes, Microsoft |
github-actions[bot] commented 3 years ago
Benchmark result # Judge result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmarks: - Target: 14 Dec 2020 - 12:12 - Baseline: 14 Dec 2020 - 12:16 * Package commits: - Target: 48518f - Baseline: a2311f * Julia commits: - Target: 788b2c - Baseline: 788b2c * Julia command flags: - Target: None - Baseline: None * Environment variables: - Target: None - Baseline: None ## Results A ratio greater than `1.0` denotes a possible regression (marked with :x:), while a ratio less than `1.0` denotes a possible improvement (marked with :white_check_mark:). Only significant results - results that indicate possible regressions or improvements - are shown below (thus, an empty table means that all benchmark results remained invariant between builds). | ID | time ratio | memory ratio | |----------------------------------------------------|------------|--------------| ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ### Target ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 11370 s 0 s 1845 s 29385 s 0 s #2 2095 MHz 27222 s 0 s 2616 s 12936 s 0 s Memory: 6.791393280029297 GB (2885.35546875 MB free) Uptime: 444.0 sec Load Avg: 1.02001953125 0.90185546875 0.47705078125 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` ### Baseline ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 20653 s 0 s 2383 s 42160 s 0 s #2 2095 MHz 40265 s 0 s 2983 s 22126 s 0 s Memory: 6.791393280029297 GB (2820.08984375 MB free) Uptime: 670.0 sec Load Avg: 1.00537109375 0.97216796875 0.60302734375 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Target result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmark: 14 Dec 2020 - 12:12 * Package commit: 48518f * Julia commit: 788b2c * Julia command flags: None * Environment variables: None ## Results Below is a table of this job's results, obtained by running the benchmarks. The values listed in the `ID` column have the structure `[parent_group, child_group, ..., key]`, and can be used to index into the BaseBenchmarks suite to retrieve the corresponding benchmarks. The percentages accompanying time and memory values in the below table are noise tolerances. The "true" time/memory value for a given benchmark is expected to fall within this percentage of the reported value. An empty cell means that the value was zero. | ID | time | GC time | memory | allocations | |----------------------------------------------------|--------------:|-----------:|----------------:|------------:| | `["alpha", "klein500.pts"]` | 21.151 s (5%) | 713.571 ms | 3.62 GiB (1%) | 33593430 | | `["alpha", "torus10k.pts"]` | 6.163 s (5%) | 110.271 ms | 1.11 GiB (1%) | 10857304 | | `["cubical", "bonsai64.dipha"]` | 6.814 s (5%) | 238.920 ms | 732.10 MiB (1%) | 12169888 | | `["cubical", "lena2048.dipha"]` | 9.153 s (5%) | 493.208 ms | 2.36 GiB (1%) | 27759518 | | `["homology", "klein200.pts"]` | 1.775 s (5%) | | 47.89 MiB (1%) | 834462 | | `["homology", "lena1024.dipha"]` | 6.925 s (5%) | 66.266 ms | 763.84 MiB (1%) | 11520025 | | `["homology", "sphere100.pts"]` | 1.525 s (5%) | 10.387 ms | 90.36 MiB (1%) | 1063917 | | `["rips", "dense", "dragon2000.pts"]` | 3.061 s (5%) | 33.678 ms | 292.72 MiB (1%) | 52255 | | `["rips", "dense", "fract-r.dist"]` | 21.243 s (5%) | 307.474 ms | 1.79 GiB (1%) | 108875 | | `["rips", "dense", "o3_1024.pts"]` | 6.741 s (5%) | 65.739 ms | 477.58 MiB (1%) | 2903827 | | `["rips", "sparse", "alpha_4_sphere_2000.spdist"]` | 9.708 s (5%) | 58.532 ms | 575.78 MiB (1%) | 3753359 | | `["rips", "sparse", "dragon2000.pts"]` | 3.331 s (5%) | 8.184 ms | 322.51 MiB (1%) | 37826 | | `["rips", "sparse", "fract-r.dist"]` | 23.756 s (5%) | 303.816 ms | 1.79 GiB (1%) | 97740 | | `["rips", "sparse", "o3_1024.pts"]` | 3.134 s (5%) | 12.482 ms | 337.97 MiB (1%) | 137110 | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 11370 s 0 s 1845 s 29385 s 0 s #2 2095 MHz 27222 s 0 s 2616 s 12936 s 0 s Memory: 6.791393280029297 GB (2885.35546875 MB free) Uptime: 444.0 sec Load Avg: 1.02001953125 0.90185546875 0.47705078125 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Baseline result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmark: 14 Dec 2020 - 12:16 * Package commit: a2311f * Julia commit: 788b2c * Julia command flags: None * Environment variables: None ## Results Below is a table of this job's results, obtained by running the benchmarks. The values listed in the `ID` column have the structure `[parent_group, child_group, ..., key]`, and can be used to index into the BaseBenchmarks suite to retrieve the corresponding benchmarks. The percentages accompanying time and memory values in the below table are noise tolerances. The "true" time/memory value for a given benchmark is expected to fall within this percentage of the reported value. An empty cell means that the value was zero. | ID | time | GC time | memory | allocations | |----------------------------------------------------|--------------:|-----------:|----------------:|------------:| | `["alpha", "klein500.pts"]` | 20.894 s (5%) | 656.613 ms | 3.62 GiB (1%) | 33593426 | | `["alpha", "torus10k.pts"]` | 6.002 s (5%) | 108.367 ms | 1.11 GiB (1%) | 10857301 | | `["cubical", "bonsai64.dipha"]` | 6.813 s (5%) | 244.907 ms | 732.10 MiB (1%) | 12169891 | | `["cubical", "lena2048.dipha"]` | 9.285 s (5%) | 504.734 ms | 2.36 GiB (1%) | 27759518 | | `["homology", "klein200.pts"]` | 1.780 s (5%) | | 47.89 MiB (1%) | 834462 | | `["homology", "lena1024.dipha"]` | 7.153 s (5%) | 251.630 ms | 763.84 MiB (1%) | 11520025 | | `["homology", "sphere100.pts"]` | 1.521 s (5%) | 10.288 ms | 90.36 MiB (1%) | 1063917 | | `["rips", "dense", "dragon2000.pts"]` | 3.110 s (5%) | 37.548 ms | 292.72 MiB (1%) | 52255 | | `["rips", "dense", "fract-r.dist"]` | 21.385 s (5%) | 319.047 ms | 1.79 GiB (1%) | 108875 | | `["rips", "dense", "o3_1024.pts"]` | 6.730 s (5%) | 69.032 ms | 477.58 MiB (1%) | 2903829 | | `["rips", "sparse", "alpha_4_sphere_2000.spdist"]` | 9.616 s (5%) | 61.656 ms | 575.80 MiB (1%) | 3753356 | | `["rips", "sparse", "dragon2000.pts"]` | 3.352 s (5%) | 8.653 ms | 322.51 MiB (1%) | 37826 | | `["rips", "sparse", "fract-r.dist"]` | 23.457 s (5%) | 315.034 ms | 1.79 GiB (1%) | 97740 | | `["rips", "sparse", "o3_1024.pts"]` | 3.112 s (5%) | 12.885 ms | 337.97 MiB (1%) | 137110 | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1031-azure #32~18.04.1-Ubuntu SMP Tue Oct 6 10:03:22 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 20653 s 0 s 2383 s 42160 s 0 s #2 2095 MHz 40265 s 0 s 2983 s 22126 s 0 s Memory: 6.791393280029297 GB (2820.08984375 MB free) Uptime: 670.0 sec Load Avg: 1.00537109375 0.97216796875 0.60302734375 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Runtime information | Runtime Info | | |:--|:--| | BLAS #threads | 2 | | `BLAS.vendor()` | `openblas64` | | `Sys.CPU_THREADS` | 2 | `lscpu` output: Architecture: x86_64 CPU op-mode(s): 32-bit, 64-bit Byte Order: Little Endian CPU(s): 2 On-line CPU(s) list: 0,1 Thread(s) per core: 1 Core(s) per socket: 2 Socket(s): 1 NUMA node(s): 1 Vendor ID: GenuineIntel CPU family: 6 Model: 85 Model name: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz Stepping: 4 CPU MHz: 2095.126 BogoMIPS: 4190.25 Hypervisor vendor: Microsoft Virtualization type: full L1d cache: 32K L1i cache: 32K L2 cache: 1024K L3 cache: 36608K NUMA node0 CPU(s): 0,1 Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl xtopology cpuid pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch invpcid_single pti fsgsbase bmi1 hle avx2 smep bmi2 erms invpcid rtm mpx avx512f avx512dq rdseed adx smap clflushopt avx512cd avx512bw avx512vl xsaveopt xsavec xsaves md_clear | Cpu Property | Value | |:------------------ |:------------------------------------------------------- | | Brand | Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz | | Vendor | :Intel | | Architecture | :Skylake | | Model | Family: 0x06, Model: 0x55, Stepping: 0x04, Type: 0x00 | | Cores | 2 physical cores, 2 logical cores (on executing CPU) | | | No Hyperthreading detected | | Clock Frequencies | Not supported by CPU | | Data Cache | Level 1:3 : (32, 1024, 36608) kbytes | | | 64 byte cache line size | | Address Size | 48 bits virtual, 46 bits physical | | SIMD | 512 bit = 64 byte max. SIMD vector size | | Time Stamp Counter | TSC is accessible via `rdtsc` | | | TSC increased at every clock cycle (non-invariant TSC) | | Perf. Monitoring | Performance Monitoring Counters (PMC) are not supported | | Hypervisor | Yes, Microsoft |
github-actions[bot] commented 3 years ago
Benchmark result # Judge result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmarks: - Target: 16 Dec 2020 - 22:52 - Baseline: 16 Dec 2020 - 22:56 * Package commits: - Target: 697880 - Baseline: a2311f * Julia commits: - Target: 788b2c - Baseline: 788b2c * Julia command flags: - Target: None - Baseline: None * Environment variables: - Target: None - Baseline: None ## Results A ratio greater than `1.0` denotes a possible regression (marked with :x:), while a ratio less than `1.0` denotes a possible improvement (marked with :white_check_mark:). Only significant results - results that indicate possible regressions or improvements - are shown below (thus, an empty table means that all benchmark results remained invariant between builds). | ID | time ratio | memory ratio | |----------------------------------------------------|------------|--------------| ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ### Target ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1032-azure #33~18.04.1-Ubuntu SMP Tue Nov 17 11:40:52 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 28975 s 0 s 2302 s 10535 s 0 s #2 2095 MHz 9159 s 0 s 2241 s 30281 s 0 s Memory: 6.7913970947265625 GB (2595.24609375 MB free) Uptime: 437.0 sec Load Avg: 1.0673828125 0.92041015625 0.48779296875 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` ### Baseline ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1032-azure #33~18.04.1-Ubuntu SMP Tue Nov 17 11:40:52 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 40046 s 0 s 2842 s 20825 s 0 s #2 2095 MHz 19754 s 0 s 2564 s 41263 s 0 s Memory: 6.7913970947265625 GB (2558.53125 MB free) Uptime: 656.0 sec Load Avg: 1.005859375 0.97900390625 0.609375 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Target result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmark: 16 Dec 2020 - 22:52 * Package commit: 697880 * Julia commit: 788b2c * Julia command flags: None * Environment variables: None ## Results Below is a table of this job's results, obtained by running the benchmarks. The values listed in the `ID` column have the structure `[parent_group, child_group, ..., key]`, and can be used to index into the BaseBenchmarks suite to retrieve the corresponding benchmarks. The percentages accompanying time and memory values in the below table are noise tolerances. The "true" time/memory value for a given benchmark is expected to fall within this percentage of the reported value. An empty cell means that the value was zero. | ID | time | GC time | memory | allocations | |----------------------------------------------------|--------------:|-----------:|----------------:|------------:| | `["alpha", "klein500.pts"]` | 20.297 s (5%) | 673.418 ms | 3.62 GiB (1%) | 33593437 | | `["alpha", "torus10k.pts"]` | 5.877 s (5%) | 110.565 ms | 1.11 GiB (1%) | 10857299 | | `["cubical", "bonsai64.dipha"]` | 6.599 s (5%) | 236.277 ms | 732.10 MiB (1%) | 12169890 | | `["cubical", "lena2048.dipha"]` | 8.870 s (5%) | 484.756 ms | 2.36 GiB (1%) | 27759518 | | `["homology", "klein200.pts"]` | 1.699 s (5%) | | 47.90 MiB (1%) | 834465 | | `["homology", "lena1024.dipha"]` | 6.857 s (5%) | 241.870 ms | 763.85 MiB (1%) | 11520025 | | `["homology", "sphere100.pts"]` | 1.455 s (5%) | 10.553 ms | 90.36 MiB (1%) | 1063919 | | `["rips", "dense", "dragon2000.pts"]` | 2.982 s (5%) | 36.599 ms | 292.72 MiB (1%) | 52255 | | `["rips", "dense", "fract-r.dist"]` | 20.629 s (5%) | 315.387 ms | 1.79 GiB (1%) | 108875 | | `["rips", "dense", "o3_1024.pts"]` | 6.513 s (5%) | 68.390 ms | 477.58 MiB (1%) | 2903844 | | `["rips", "sparse", "alpha_4_sphere_2000.spdist"]` | 9.351 s (5%) | 61.276 ms | 575.78 MiB (1%) | 3753357 | | `["rips", "sparse", "dragon2000.pts"]` | 3.238 s (5%) | 8.360 ms | 322.51 MiB (1%) | 37826 | | `["rips", "sparse", "fract-r.dist"]` | 22.763 s (5%) | 306.772 ms | 1.79 GiB (1%) | 97740 | | `["rips", "sparse", "o3_1024.pts"]` | 3.001 s (5%) | 12.873 ms | 337.97 MiB (1%) | 137110 | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1032-azure #33~18.04.1-Ubuntu SMP Tue Nov 17 11:40:52 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 28975 s 0 s 2302 s 10535 s 0 s #2 2095 MHz 9159 s 0 s 2241 s 30281 s 0 s Memory: 6.7913970947265625 GB (2595.24609375 MB free) Uptime: 437.0 sec Load Avg: 1.0673828125 0.92041015625 0.48779296875 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Baseline result # Benchmark Report for */home/runner/work/Ripserer.jl/Ripserer.jl* ## Job Properties * Time of benchmark: 16 Dec 2020 - 22:56 * Package commit: a2311f * Julia commit: 788b2c * Julia command flags: None * Environment variables: None ## Results Below is a table of this job's results, obtained by running the benchmarks. The values listed in the `ID` column have the structure `[parent_group, child_group, ..., key]`, and can be used to index into the BaseBenchmarks suite to retrieve the corresponding benchmarks. The percentages accompanying time and memory values in the below table are noise tolerances. The "true" time/memory value for a given benchmark is expected to fall within this percentage of the reported value. An empty cell means that the value was zero. | ID | time | GC time | memory | allocations | |----------------------------------------------------|--------------:|-----------:|----------------:|------------:| | `["alpha", "klein500.pts"]` | 20.341 s (5%) | 689.386 ms | 3.62 GiB (1%) | 33593429 | | `["alpha", "torus10k.pts"]` | 5.922 s (5%) | 112.615 ms | 1.11 GiB (1%) | 10857301 | | `["cubical", "bonsai64.dipha"]` | 6.571 s (5%) | 238.765 ms | 732.11 MiB (1%) | 12169895 | | `["cubical", "lena2048.dipha"]` | 8.802 s (5%) | 489.795 ms | 2.36 GiB (1%) | 27759518 | | `["homology", "klein200.pts"]` | 1.721 s (5%) | | 47.90 MiB (1%) | 834464 | | `["homology", "lena1024.dipha"]` | 6.837 s (5%) | 243.568 ms | 763.84 MiB (1%) | 11520027 | | `["homology", "sphere100.pts"]` | 1.461 s (5%) | 10.627 ms | 90.35 MiB (1%) | 1063913 | | `["rips", "dense", "dragon2000.pts"]` | 2.928 s (5%) | 36.146 ms | 292.72 MiB (1%) | 52255 | | `["rips", "dense", "fract-r.dist"]` | 20.577 s (5%) | 306.004 ms | 1.79 GiB (1%) | 108875 | | `["rips", "dense", "o3_1024.pts"]` | 6.478 s (5%) | 68.949 ms | 477.59 MiB (1%) | 2903847 | | `["rips", "sparse", "alpha_4_sphere_2000.spdist"]` | 9.398 s (5%) | 52.161 ms | 575.79 MiB (1%) | 3753362 | | `["rips", "sparse", "dragon2000.pts"]` | 3.220 s (5%) | 8.417 ms | 322.51 MiB (1%) | 37826 | | `["rips", "sparse", "fract-r.dist"]` | 22.752 s (5%) | 309.130 ms | 1.79 GiB (1%) | 97740 | | `["rips", "sparse", "o3_1024.pts"]` | 3.037 s (5%) | 12.826 ms | 337.97 MiB (1%) | 137110 | ## Benchmark Group List Here's a list of all the benchmark groups executed by this job: - `["alpha"]` - `["cubical"]` - `["homology"]` - `["rips", "dense"]` - `["rips", "sparse"]` ## Julia versioninfo ``` Julia Version 1.5.3 Commit 788b2c77c1 (2020-11-09 13:37 UTC) Platform Info: OS: Linux (x86_64-pc-linux-gnu) Ubuntu 18.04.5 LTS uname: Linux 5.4.0-1032-azure #33~18.04.1-Ubuntu SMP Tue Nov 17 11:40:52 UTC 2020 x86_64 x86_64 CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: speed user nice sys idle irq #1 2095 MHz 40046 s 0 s 2842 s 20825 s 0 s #2 2095 MHz 19754 s 0 s 2564 s 41263 s 0 s Memory: 6.7913970947265625 GB (2558.53125 MB free) Uptime: 656.0 sec Load Avg: 1.005859375 0.97900390625 0.609375 WORD_SIZE: 64 LIBM: libopenlibm LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512) ``` --- # Runtime information | Runtime Info | | |:--|:--| | BLAS #threads | 2 | | `BLAS.vendor()` | `openblas64` | | `Sys.CPU_THREADS` | 2 | `lscpu` output: Architecture: x86_64 CPU op-mode(s): 32-bit, 64-bit Byte Order: Little Endian CPU(s): 2 On-line CPU(s) list: 0,1 Thread(s) per core: 1 Core(s) per socket: 2 Socket(s): 1 NUMA node(s): 1 Vendor ID: GenuineIntel CPU family: 6 Model: 85 Model name: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz Stepping: 4 CPU MHz: 2095.196 BogoMIPS: 4190.39 Hypervisor vendor: Microsoft Virtualization type: full L1d cache: 32K L1i cache: 32K L2 cache: 1024K L3 cache: 36608K NUMA node0 CPU(s): 0,1 Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl xtopology cpuid pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch invpcid_single pti fsgsbase bmi1 hle avx2 smep bmi2 erms invpcid rtm mpx avx512f avx512dq rdseed adx smap clflushopt avx512cd avx512bw avx512vl xsaveopt xsavec xsaves md_clear | Cpu Property | Value | |:------------------ |:------------------------------------------------------- | | Brand | Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz | | Vendor | :Intel | | Architecture | :Skylake | | Model | Family: 0x06, Model: 0x55, Stepping: 0x04, Type: 0x00 | | Cores | 2 physical cores, 2 logical cores (on executing CPU) | | | No Hyperthreading detected | | Clock Frequencies | Not supported by CPU | | Data Cache | Level 1:3 : (32, 1024, 36608) kbytes | | | 64 byte cache line size | | Address Size | 48 bits virtual, 46 bits physical | | SIMD | 512 bit = 64 byte max. SIMD vector size | | Time Stamp Counter | TSC is accessible via `rdtsc` | | | TSC increased at every clock cycle (non-invariant TSC) | | Perf. Monitoring | Performance Monitoring Counters (PMC) are not supported | | Hypervisor | Yes, Microsoft |