Challenges faced in the snakemake pipeline

mudiboevans / Group_1-Reproducible-CCBG-pipeline

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Challenges faced in the snakemake pipeline #4

Open mudiboevans opened 4 years ago

mudiboevans commented 4 years ago

Highlight the challenges you encountered while making a workflow in snakemake

mudiboevans commented 4 years ago

Incorporation of python scripts into snakefile was a challenge since one script was dependent on other scripts.

mudiboevans commented 4 years ago

Being the first time for some members to work on long read data and workflow language time was not enough to have a complete comprehension of the workflow.