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mueller-lab / EmbryoNet

EmbryoNet initial commit
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Question about FishLabeler #15

Closed Leondyw closed 8 months ago

Leondyw commented 8 months ago

Dear Authors: After I use the GUI ,FishClassfier-GPU, I get three files.

屏幕截图 2024-02-21 205911 
    They are like this .Which one should I use ? . And I have used all of them , why I got different consequence.
    I would appreciate brilliantly it if you can help me solve this problem . Have a good day! Thanks!
hagorms commented 8 months ago

Hello, Leondyw! Thank you for using our software.

Classified_result_1_json_class_agnostic is a result generated and saved with only the default class (UNKNOWN). All embryos are labeled as unknowns. This dataset (json folder) is usually used for human labeling.

EmbryoNet_GPU_classified_result_1_json is a folder with results before applying transition logic. Every embryo is classified independently 8 times (4 90-degrees-rotations and 4 mirrored images of these rotations) and classifier uses majority vote to classify.

EmbryoNet_GPU_classified_result_1_json_corrected uses the transition logic to "smooth" the EmbryoNet_GPU_classified_result_1_json.

If you have any other questions, please re-open the issue. Best regards, Matvey Safroshkin