multipaths / DiffuPath

A Python package for analyzing harmonized biological networks through diffusion algorithms
https://diffupath.readthedocs.io/en/latest
Apache License 2.0
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Cannot list dbs using CLI #4

Closed SergiPicart closed 4 years ago

SergiPicart commented 4 years ago

Hi all, I'm trying to list the databases. Today I installed the latest versions of diffupy and diffupath on a virtual environment. When running the CLI command to list dbs, I encounter this:

(venv) sergi:tmp$ diffupath database ls
Traceback (most recent call last):
  File "/home/sergi/tmp/venv/bin/diffupath", line 5, in <module>
    from diffupath.cli import main
  File "/home/sergi/tmp/venv/lib/python3.6/site-packages/diffupath/cli.py", line 16, in <module>
    from diffupy.utils import process_network_from_cli, _process_input, process_kernel_from_cli, print_dict_dimensions, \
ImportError: cannot import name '_process_input'

Is this something on my end? Thanks!