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mummer4 / mummer

Mummer alignment tool
Artistic License 2.0
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no results #163

Open dongyangzheng opened 3 years ago

dongyangzheng commented 3 years ago

Hi professor I am using nucmer for wheat genome compare with a 500GB RAM machine . but there is nothing output for 3 days . Thanks

JiaoBingke commented 2 years ago

If you use default parameters of nucmer? When I aligned two soybean genomes, I used --maxmatch parameter. However, there was no result after 5 days of running. Then I used default parameters of nucmer, like "nucmer refgenome qrygenome -t 20 -p nucmer_default_para". The task finished after 2 hours.

hengbingao commented 1 year ago

I also meet the same question when I use mummer to align wheat genome, there are no results in my output file.