search

mummer4 / mummer

Mummer alignment tool
Artistic License 2.0
433 stars 108 forks source link

WARNING: Unable to run 'false out.gp', Inappropriate ioctl for device #174

Open bauder97 opened 2 years ago

bauder97 commented 2 years ago

I am having issues trying to create the following mummerplot:

mummer -maxmatch -n -l 100 ratg13.fasta prC31.fasta > ratg13-prc31.mumm mummer -maxmatch -n -l 50 cov-fasta/ncbi-ref.fasta cov-fasta/ratg13.fasta > output/ncbiref-ratg13-09091457.mumm

mummerplot output/ncbiref-ratg13-09091457.mumm mummerplot -x "[0,32000]" -y "[0,32000]" --png output/ncbiref-ratg13-09091457.mumm

It returns the following warning and will not create a png image:

WARNING: Unable to run 'false out.gp', Inappropriate ioctl for device

nathanweeks commented 1 year ago

https://github.com/mummer4/mummer/issues/36#issuecomment-420684643