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muschellij2 / extrantsr

R Package to build on ANTsR
GNU General Public License v3.0
6 stars 3 forks source link

can't install #13

Closed chaolixu closed 4 years ago

chaolixu commented 4 years ago

I can't install "extrantsr" package in my R package. it said the package had non-zero exit status.

make[6]: [Examples/antsApplyTransformsToPoints] Error 1 make[6]: Leaving directory '/tmp/Rtmp652CYB/R.INSTALL5eb24bc652e7/ANTsRCore/src/antb/ANTS-build' CMakeFiles/Makefile2:577: recipe for target 'Examples/CMakeFiles/antsApplyTransformsToPoints.dir/all' failed make[5]: [Examples/CMakeFiles/antsApplyTransformsToPoints.dir/all] Error 2 make[5]: Waiting for unfinished jobs.... [ 41%] Linking CXX static library libl_antsAffineInitializer.a make[6]: Leaving directory '/tmp/Rtmp652CYB/R.INSTALL5eb24bc652e7/ANTsRCore/src/antb/ANTS-build' [ 41%] Built target l_antsAffineInitializer make[5]: Leaving directory '/tmp/Rtmp652CYB/R.INSTALL5eb24bc652e7/ANTsRCore/src/antb/ANTS-build' Makefile:162: recipe for target 'all' failed make[4]: [all] Error 2 make[4]: Leaving directory '/tmp/Rtmp652CYB/R.INSTALL5eb24bc652e7/ANTsRCore/src/antb/ANTS-build' CMakeFiles/ANTS.dir/build.make:113: recipe for target 'ANTS-prefix/src/ANTS-stamp/ANTS-build' failed make[3]: [ANTS-prefix/src/ANTS-stamp/ANTS-build] Error 2 make[3]: Leaving directory '/tmp/Rtmp652CYB/R.INSTALL5eb24bc652e7/ANTsRCore/src/antb' CMakeFiles/Makefile2:72: recipe for target 'CMakeFiles/ANTS.dir/all' failed make[2]: [CMakeFiles/ANTS.dir/all] Error 2 make[2]: Leaving directory '/tmp/Rtmp652CYB/R.INSTALL5eb24bc652e7/ANTsRCore/src/antb' Makefile:116: recipe for target 'all' failed make[1]: [all] Error 2 make[1]: Leaving directory '/tmp/Rtmp652CYB/R.INSTALL5eb24bc652e7/ANTsRCore/src/antb' Makevars:12: recipe for target 'libs' failed make: [libs] Error 2 ERROR: compilation failed for package 'ANTsRCore'

muschellij2 commented 4 years ago

This is an ANTsRCore issue, not an extrantsr, please open an issue at https://github.com/ANTsX/ANTsRCore/issues with the full installation code:

chaolixu commented 4 years ago

Hi, Pro. Muschelli,

Thanks a lot, it's really helpful! I will open an issue by following the instruction.

Thanks Chaoli

From: John Muschelli notifications@github.com Sent: Thursday, November 14, 2019 4:02 AM To: muschellij2/extrantsr extrantsr@noreply.github.com Cc: Chaoli Xu chaoli.xu@duke.edu; Author author@noreply.github.com Subject: Re: [muschellij2/extrantsr] can't install (#13)

This is an ANTsRCore issue, not an extrantsr, please open an issue at https://github.com/ANTsX/ANTsRCore/issueshttps://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_ANTsX_ANTsRCore_issues&d=DwMCaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=M9W5Lvqwk1okBtyIBuvTZQ&m=ijMzabbcTCcl-vhTyb7CqW4A0W0WAJiGjyg5fRsGMLQ&s=-2javwBZnGSMF0tX3Z7mwq5BM-wECHm0AromnXE4AcA&e= with the full installation code:

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