system() does not work well on Windows. Use shell() instead.
In addition, itksnap.exe extracted from windows-x86_64.zip turns out to be an installation file and still needs manual installation. I packed executables on my system and this zip file should work well replacing your edition of windows-x86_64.zip.
P.s. I'm totally new to neuroimaging analysis. Great thanks to the MOOC Neurohacking in R you provided on Coursera!
system()does not work well on Windows. Useshell()instead. In addition,itksnap.exeextracted fromwindows-x86_64.zipturns out to be an installation file and still needs manual installation. I packed executables on my system and this zip file should work well replacing your edition ofwindows-x86_64.zip. P.s. I'm totally new to neuroimaging analysis. Great thanks to the MOOC Neurohacking in R you provided on Coursera!